| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0748 |
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| Symbol | |
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| ID | 6161316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 801230 |
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| End bp | 802300 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641663498 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001789786 |
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| Protein GI | 171057437 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.666913 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAG CGCCAACCCA GCCCCTGAAC CACCCGCTTC ATTCCGTCCG CATCGTCGAA
TTCGAGGGCC TCGGCCCCGG CCCGCTGGCC GGCTGGGTGC TGGCCGGCCT GGGCGCGCAG
GTCACGGTGA TCCGCCGCCC GGGTGGCAAT GCGATGGCCG AGCAGCTCGG CGGCGCCGGC
GGCAATCGGC TGCTCGACGG CAAGCAGATC GTCACGCTCG ACCTCAAGCG CGCGGCCGAC
CGCGCCGCCG CGCTCGACCT CGTCGCCCAA GCCGACGCGC TGATCGAAGG CAACCGGCCC
GGCGTGATGG AGCGCCTGGG CCTGGGCCCG GCCGACTGCG CCGAGCGCAA CCCGCGGCTG
GTCTACGGCC GCATGACCGG CTGGGGCCAG ACCGGGCCGC TGGCGCAGGT GGTCGGCCAC
GATCTGAACT ACGTCGCGCT CAGCGGCATG CTGTCGCTGG CGGCGCGGCG CGGCGGCAAC
ACGCCGCATG AACCGCCGAT CGTGCCCCCC ACCCTGGTCG GCGACGCCGG CGGCGCGCTC
GGCCTGGCGC TGGGCCTCGT CAGCGCGGTG ATGGCGGCGC GCCAGAGCGG CCAGGGCTGC
GTGGTCGATG CGGCCATCGT CGACGTGGTG GCGATGCTCG GCACGCTGGC GCTGTGGATC
CACGGCGGCG GCCAGCTGGC CGGGCCGGTG GCCGACAGCC CCTTCCACGA CTCGCCGTTC
TACGACGTCT ACCGCTGCGC CGACGGCCGC CACCTGACGC TGGCGCCGCT AGAGCCGGCC
TTCTACGTCG AGGCCCTCAA GCGCCTGGGG CTCGACGACG TCGCCCCGGA CAGCCAGTAC
GACCTGCGCA CCTGGCCGGC GCTGAAGGCG CGGCTGACCG CCCTGTTCGC CAGCCAGCCG
CGCGCGCACT GGGACGCGCG GCTCGAAGGC AGCGACGCCT GCTACGCGCC GGTGCTCGAC
CTGCACGAAG CCGTCACCCA CCCGCACAAC CAGGCCCGCG GCACCTTCCG GCAAGACGCC
CAGGGCCGCA TCCACGCGGC CATCGCGCCG CGTTTCACGC CGCTGCGCTG A
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| Protein sequence | MTQAPTQPLN HPLHSVRIVE FEGLGPGPLA GWVLAGLGAQ VTVIRRPGGN AMAEQLGGAG
GNRLLDGKQI VTLDLKRAAD RAAALDLVAQ ADALIEGNRP GVMERLGLGP ADCAERNPRL
VYGRMTGWGQ TGPLAQVVGH DLNYVALSGM LSLAARRGGN TPHEPPIVPP TLVGDAGGAL
GLALGLVSAV MAARQSGQGC VVDAAIVDVV AMLGTLALWI HGGGQLAGPV ADSPFHDSPF
YDVYRCADGR HLTLAPLEPA FYVEALKRLG LDDVAPDSQY DLRTWPALKA RLTALFASQP
RAHWDARLEG SDACYAPVLD LHEAVTHPHN QARGTFRQDA QGRIHAAIAP RFTPLR
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