Gene Lcho_0738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0738 
Symbol 
ID6160675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp785370 
End bp785822 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content70% 
IMG OID641663488 
Producthypothetical protein 
Protein accessionYP_001789776 
Protein GI171057427 
COG category[S] Function unknown 
COG ID[COG3753] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCTGT TTGATTCGAT GCTGGGCGCA GCCACGCAAG CTGCCGGCGG CGCACTCGGC 
CAGGTGCTGG GCCAGTCGGG CGGATCGTCC GGCAACCTGA TGGATGGCCT GTCAGGCCTG
CTCGGTGGTG GCGAAGGCGG CGCGGCTGGC CTGGCCGGGC TGGTGCAGAA GTTCCAGGAA
AGCGGCTTGA GCGAGGTGGT GGCCTCCTGG GTTTCGACCG GGCCGAACCT GCCGGTCACG
GCCGAGCAGA TCGGCCAGGT GTTCGACCAC GAGACCATCG GGCGTTTTGC CCAGTCGGTC
GGCGTCGACC CGCAACAGGC GGCCGGCCAG ATCGCGTCGC TGCTGCCCAA GGTGGTGGAC
GCACTGACAC CGGACGGCCA GTTGCCGAGC GGCGCAGGCA CCGACCTGTC GGGCCTGCTG
CAACAAGGCC TCGGCGGCCT GCTCGGCCGC TGA
 
Protein sequence
MGLFDSMLGA ATQAAGGALG QVLGQSGGSS GNLMDGLSGL LGGGEGGAAG LAGLVQKFQE 
SGLSEVVASW VSTGPNLPVT AEQIGQVFDH ETIGRFAQSV GVDPQQAAGQ IASLLPKVVD
ALTPDGQLPS GAGTDLSGLL QQGLGGLLGR