Gene Lcho_0732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0732 
Symbol 
ID6163069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp780790 
End bp781359 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content68% 
IMG OID641663482 
Producttranscription elongation factor GreB 
Protein accessionYP_001789770 
Protein GI171057421 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID[TIGR01461] transcription elongation factor GreB 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGG CTTTCACCCG CGAATCCGCA GGCGACGAAG ACGACGACGA CCCGCTCGGC 
GCCCTGCCCC CGCTGCCCGC TGGCGCACGC AACTACATGA CGCCGCAGGG CTGGTCGAGC 
CTGCGCGCGG AGTTGATGAC CCTGCTGGAT GTGGAACGCC CACGGGTGGT CGAGGCGGTT 
TCATGGGCCG CCAAGAACGG CGACCGCTCC GAGAACGGCG ACTACATCTA CGGCAAGAAG 
CGCCTGCGCG AGATCGATCG GCGCATCCGT TTCCTGACCA AGCGCCTCGA CATCGCCGAG 
GTGGCCGACC CGTCGCTGCA CCATGGCAGC GACCAGGTCT TCTTCGGCGC CACCGTCACC 
TACGCCAACT CGCGCGGCGA CGAGCGCACG GTCACGATCA AGGGCATCGA CGAGTCGGAC 
AGCCTGAAGG GTGAAGTGAG CTGGGTGTCG CCGATCGCGC GCGCGCTGAT CAAGGCCCGC 
GAAGGCGACG AGGTGCAGCT GATGACGCCC GGCGGCCTGG AGCGGCTCGA GGTGCTCGAG 
GTGAGCTACC CGGCGCCGCT CAACCCTTGA
 
Protein sequence
MSKAFTRESA GDEDDDDPLG ALPPLPAGAR NYMTPQGWSS LRAELMTLLD VERPRVVEAV 
SWAAKNGDRS ENGDYIYGKK RLREIDRRIR FLTKRLDIAE VADPSLHHGS DQVFFGATVT 
YANSRGDERT VTIKGIDESD SLKGEVSWVS PIARALIKAR EGDEVQLMTP GGLERLEVLE 
VSYPAPLNP