| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0720 |
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| Symbol | |
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| ID | 6162957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 768631 |
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| End bp | 769527 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641663472 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001789760 |
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| Protein GI | 171057411 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.317431 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTGC GTGACCTGCG CTACTTCGAG ACCATCGCCG AGCTGGAACA CATCGGGCGC
GCGACCGAAC GCCTGCATCG CACGCAGCCC GCGCTGACCA GCAGCGTGCG GCGTCTGGAG
GAGGCGGTCG GCGCCCCCTT GTTCGAGAAG GCGGGACGGG GGATCCGGCT CACGCAAGCG
GGCAAGGTCT TGCTCAAGTG GGCGCAGCGT GTGCGCTTCG ATGTCGAGGA TGCCCGCCGG
GAGATCGGCG ACATCGACCG TGGCCTGTCA GGCCACATCC GCATCGGCAT CGTGCCGACC
GCCGCCCAGT TCATCCTGCC GCCGGCCGCG CGGCAGCTGA TGTCGGTGGC ACCCGAGGTG
ACCCTGAGAA CGGTCGTCGG CCTGATCGAC ACGCTCAAGC CCTTGCTGCA CGCCGGTGAA
CTCGACTTGA TGGTCGCCAC CGAAAGTCCC CCGGAGGCCG GGTTCACGTC GCAGCGCCTG
GCCGAGGACC CCATCGTCGT GGCCGCCAGT GCGACGCATC CGATCTTCGC CAACCCGCCG
ACCTTGCGTG ATCTGACGAA GTTTCGATGG GTTCTGCAGC CCCCAGGCGC ACCCACGCGC
GACTGGCTCG ATCACACCTT CGATCGAAAA CGCCTGCCGC GACCGCAAGT CCAGGTCGAG
AGCACGATGT TGTTGATGCT GCCCGCGCTG ATCGCCGAAA CGGGACTCCT GAGCTTCATC
TCGCGCCATC ATCTCGGACC GTTCGAGAGC CGGTCGCCGC TCAAGGAAGT GCCGTTGAAG
GAAACGACCA TGCATCGGCG CCTGGTCGTG ACCTACCGCG AGACCCGCTA TCTGTTGCCC
GCGGCCCGGT TGTTGATCTC GTTTCTGGGT GAGGCCGGCC ACGGGGCCGG AGAATGA
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| Protein sequence | MDLRDLRYFE TIAELEHIGR ATERLHRTQP ALTSSVRRLE EAVGAPLFEK AGRGIRLTQA
GKVLLKWAQR VRFDVEDARR EIGDIDRGLS GHIRIGIVPT AAQFILPPAA RQLMSVAPEV
TLRTVVGLID TLKPLLHAGE LDLMVATESP PEAGFTSQRL AEDPIVVAAS ATHPIFANPP
TLRDLTKFRW VLQPPGAPTR DWLDHTFDRK RLPRPQVQVE STMLLMLPAL IAETGLLSFI
SRHHLGPFES RSPLKEVPLK ETTMHRRLVV TYRETRYLLP AARLLISFLG EAGHGAGE
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