| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0717 |
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| Symbol | |
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| ID | 6163093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 765827 |
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| End bp | 766750 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641663469 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001789757 |
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| Protein GI | 171057408 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.336385 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGCGA TCAAGCCAAC CTTCCTCGTC ACGGGCAGCG ATCTCGCCGC CGCGGCGCTG
GCGCTGCTGC ACGACCACGA GGTCGTCTAT GCCGGCAAGA CGCCGACCGA GGATCACATC
GTCGCGCTGT GCCGGCAGCA CGACCCGGTG GCGATCATCG TGCGCTACAG CAAGGTGGGC
GCCGCCGCGA TGGACGCCGC GCCAAGCCTG AAGGTGATCT CCAAGCACGG CAGCGGCACC
GACACGATCG ACAAGAGCGC CGCCGCTGCG CGTGGCATCC AGGTTGTCGC GGCGGCCGGC
GCCAACGCGG CGGCCGTCGC CGAGCATGCG CTGGCGCTGT TGATGGCCTG CGCCAAGTCG
GTGGTCACGC TCGATGCCCG CATGCGTCAG GGCCACTGGG ACAAGGCAAC CCACAAGAGC
GTCGAACTCG AAGGCCGCAC GGTCGGTTTG ATCGGACTCG GTGCGATCGG CCAACGCTTC
GCGCGCATGG CCGACGCGAT GGGCATGCGC GTGCTCGGCT TCGACCCTTT TGCCAAGGAG
CTGCCGGACT ACATCGAACG CGCCGAGCTG GCGACGATCT GGCGCGAGTC GGACGTGATC
TCGCTGCACT GCCCGCTGAC GCCCGAAAAC GCGAAGCTGC TGAATGCGCA GACGCTGGGC
GCCTGCAAGA AGGGCGTGAT CGTCGTCAAC ACCGCACGTG GCGGCCTGAT CGACGAGCCA
GCGCTGCTGG CGGCCATCCG CAGCGGGCAG GTGGGCAGCG CGGGGTTGGA CAGCTTCGCC
GCCGAACCGA TGACGGCGCC GCATCCCTTC CACGGCGAAG CGCGCATCAC GCTGAGTCCG
CACATCGGCG GCGTCACCGC CGATGCCTAC GTCAAGATGG GCGTGGCCGC GGCGAAGAAC
GCACTGGCCG TGCTGCAGGG CTGA
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| Protein sequence | MSAIKPTFLV TGSDLAAAAL ALLHDHEVVY AGKTPTEDHI VALCRQHDPV AIIVRYSKVG
AAAMDAAPSL KVISKHGSGT DTIDKSAAAA RGIQVVAAAG ANAAAVAEHA LALLMACAKS
VVTLDARMRQ GHWDKATHKS VELEGRTVGL IGLGAIGQRF ARMADAMGMR VLGFDPFAKE
LPDYIERAEL ATIWRESDVI SLHCPLTPEN AKLLNAQTLG ACKKGVIVVN TARGGLIDEP
ALLAAIRSGQ VGSAGLDSFA AEPMTAPHPF HGEARITLSP HIGGVTADAY VKMGVAAAKN
ALAVLQG
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