Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0709 |
Symbol | |
ID | 6163542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 758111 |
End bp | 759427 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641663461 |
Product | fumarylacetoacetase |
Protein accession | YP_001789749 |
Protein GI | 171057400 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | [TIGR01266] fumarylacetoacetase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.981478 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCACC TGAACGAAAC GCACGCGCCC TCGTTGCGCA GCTGGATCGA CAGCGCGAAT GCGCACGACA CGGATTTCCC GATCCAGAAC CTGCCGTTCG CGGTGTTCCG GCGTGACGGC ACCGACGAGC CGTTCCGAGG CGGCGTGGCC ATCGGTGACC AGATCGTGGA CCTGGCAGCG CTGGCCGCCG AGCGCCCTTT CACAGGCGAC GCCAGCGTGG CCTTGCAGGC GGCAGCCAGC GATTCTTTGA ATGGCTTGAT GGCGCTCGGC CCGACAGCCT GGTCTGCGCT ACGCCTGGCG CTTTCGAAGG CGCTGCGCAT GCAGTCGGCG TCCAGGGGCC TGGTGGAAGC CTGCCTGGTT CCCCAGGCCG CGGCGGAGTT TGCCGTCCCG GCCCGGATCG GCGACTACAC GGACTTCTAC ACCTCGGTCC ATCACGCCAC CAACATCGGC AGGCAGTTCC GACCGGACCA GCCGCTGCTG CCCAACTACA AGTGGGTGCC GATCGGCTAT CACGGGCGGT CTTCAAGCAT CGGCGTGTCG GGCCTGTCCT TCCCGCGGCC GATCGGCCAG ATGATGCGAC CCGGTGCGCC GTCGCCTGTG GTCGGGCCTT GTGAGCGACT CGATTACGAG CTGGAACTGG GCATCTTCAT CGGGCCGGGA AACGCGACGG GCCGGCCCGT GTCGATGGAT GAGGCCGAAT CGCAGGTGTT CGGGCTGTGC CTGCTCAACG ACTGGTCGTC GCGGGACGTC CAGGGCTGGG AATACCAGCC GCTCGGCCCC TTCCTGTCGA AGAATTTCGC CACGACCCTT TCTCCCTGGA TCGTGACGTT CGAGGCCCTC GCGCCCTTCA GGGTGCCGTT CGTGCGGCCG GCCGGTGACC CGGATCCGCT CCCCTACCTC GATTCCCCGG CCAACCGGGC CGAGGGCGCG CTGGACATCC GGCTGGAGGT CGACCTGCAG TCCCGACTCA TGCGCGAGCG CGGCCTGAGT CCCCAGTGTC TCACCTCGAC GAGCTACCGT CATGCCTACT GGACCCCCGC GCAGTTGGTG ACCCACCACA CGATGAACGG CTGCAACCTG CGACCGGGCG ATCTGTTCGG CAGTGGCACT CTTTCAGGCC CGACGCTTCA GGAGGCCGGG GCGCTGATCG AGCTGACGGT GGGCGGCCAG CAGCCACTGA CCCTTGCGGG CGGTGAATCC CGAACCTACC TGGTCGATGG CGACAGCGTG ACCTTGCGCG GCTGGTGCGA GGCGCCCGGG GCTGTGCGCA TCGGATTGGG TGCCTGCATC GGGACGGTGC TGCCCACGAC ATCATGA
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Protein sequence | MAHLNETHAP SLRSWIDSAN AHDTDFPIQN LPFAVFRRDG TDEPFRGGVA IGDQIVDLAA LAAERPFTGD ASVALQAAAS DSLNGLMALG PTAWSALRLA LSKALRMQSA SRGLVEACLV PQAAAEFAVP ARIGDYTDFY TSVHHATNIG RQFRPDQPLL PNYKWVPIGY HGRSSSIGVS GLSFPRPIGQ MMRPGAPSPV VGPCERLDYE LELGIFIGPG NATGRPVSMD EAESQVFGLC LLNDWSSRDV QGWEYQPLGP FLSKNFATTL SPWIVTFEAL APFRVPFVRP AGDPDPLPYL DSPANRAEGA LDIRLEVDLQ SRLMRERGLS PQCLTSTSYR HAYWTPAQLV THHTMNGCNL RPGDLFGSGT LSGPTLQEAG ALIELTVGGQ QPLTLAGGES RTYLVDGDSV TLRGWCEAPG AVRIGLGACI GTVLPTTS
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