Gene Lcho_0702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0702 
Symbol 
ID6163750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp750830 
End bp751984 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content70% 
IMG OID641663454 
Productresponse regulator receiver modulated CheB methylesterase 
Protein accessionYP_001789742 
Protein GI171057393 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.327183 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAGA CCCGCGTGGT GGTGGTCGAC GATTCGGCGC TGGTGCGCAG CCTGCTGGCC 
GAGATCATCA ATCGCCAGAG CGACATGGAG TGCATCGGCG CGGCCAGCGA CCCGATCGCC
GCGCGCGAGA TGATCCGCAG CCTCGACCCG GACGTGATCA CGCTCGACGT CGAGATGCCG
CGCATGGACG GCATCGACTT CCTCGCCAAG CTGATGCGCC TGCGACCGAT GCCGGTGGTG
ATGGTCTCGA CGCTGACCGA GCGAGGCGCC GAAGTGACCT TGCGTGCGCT CGAATTCGGC
GCGATCGACT TCGTCGCCAA GCCCAAGATC GGCGTCGCCA ACGGCCTGCG TCTGCTGGCG
CAGGAAATCA CCGAGAAGGT GCGCATCGCC GCCGGTGCGC GGGTCACCAA GCTGGCGCCG
GCACCGGCCC ATGCGCCCCC GCGTGCGCCA TCGCACGGCC ACGCTGCACA CGGGTCGCAG
GGGCCTTCCG GCGCATCGTC TGCGCCAGAG ACCGCGCCGC CGACCGGCCC CGTGCCGAGC
CCGTTGGGGC GGCTGTCGAC CGAAAAGCTG ATCTTCATCG GCGCCTCCAC CGGCGGCACC
GAAGCCACCC GCGAGGTGCT GTGCGGCCTG CCCGCCGACG CGCCGGCGAT CCTGATCACG
CAGCACATGC CACCCGGCTT CACCACCAGC TACGCGGCAC GGCTCAACAA CCTGTGCCGC
ATCGCGGTGA AGGAGGCCGC GGATGGCGAG CGCATCCTGC CCGGCCATGC CTATCTGGCG
CCGGGCGGAT TTCACCTGTC GGTGGAGCGC TCGGGCGCCA ACTACATCGC CCGGGTGCGC
GACGGCGATC CGGTCAACCG GCATCGGCCG AGCGTCGAGG TGCTGTTCCA GTCGGCTGCG
CGGGTGGCCG GGCGCAACGC GATCGGCGTC ATGCTGACCG GCATGGGTGC CGACGGTGCC
CGCGCGATGA AGGAAATGCG CGACGCCGGT GCCTACAACG TCGCGCAGGA CGAGGCCAGC
TGCGTCGTCT TCGGCATGCC GCGCGAGGCG ATTGCGGCCG GCGCCTGCCA GGAGGTGCTG
CCGGTCAAGC GCATTGCCCA GCACTTGATC GAACATCTGC GCAGCACCGC CGGTGCGGCC
TTGAGCCGGG TCTGA
 
Protein sequence
MPKTRVVVVD DSALVRSLLA EIINRQSDME CIGAASDPIA AREMIRSLDP DVITLDVEMP 
RMDGIDFLAK LMRLRPMPVV MVSTLTERGA EVTLRALEFG AIDFVAKPKI GVANGLRLLA
QEITEKVRIA AGARVTKLAP APAHAPPRAP SHGHAAHGSQ GPSGASSAPE TAPPTGPVPS
PLGRLSTEKL IFIGASTGGT EATREVLCGL PADAPAILIT QHMPPGFTTS YAARLNNLCR
IAVKEAADGE RILPGHAYLA PGGFHLSVER SGANYIARVR DGDPVNRHRP SVEVLFQSAA
RVAGRNAIGV MLTGMGADGA RAMKEMRDAG AYNVAQDEAS CVVFGMPREA IAAGACQEVL
PVKRIAQHLI EHLRSTAGAA LSRV