Gene Lcho_0696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0696 
Symbol 
ID6163428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp746133 
End bp746813 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content75% 
IMG OID641663448 
ProductSmr protein/MutS2 
Protein accessionYP_001789736 
Protein GI171057387 
COG category[S] Function unknown 
COG ID[COG2840] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.648126 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGCCGC AAGGCCGCCA CGGCTGGGCC GATCTCGACC AGATCGGTCG CCAGTTGCGC 
GAGCAGCGCA TCGCCGCCGA GCAGGCCGCC GCGCGCGAAC GCGCCGAAGC GGCGGCGCGC 
CAGCGCGAGA AGGAGCTGTT CGTGCGCAGC ATCGGCGCGG TCATCCCCAT GCCGCCGAGC 
GACCGCGCCG ACATGGCCCG GCCACGCCCC GCGCCGCTGC CGCTGCAGCG CGAGCTCGAC 
GACGTGATGG TGCTGCGCTC GTCGCTGTCG GACGACTTCG ACGCCGAATC GCTGCTCGAG 
ACCGACGATC AGCTGTCCTA CCGGCGCGTG GGGCTCGGGC CCGACGTGCT GAAGAAGCTG 
CGGCTGGGGC GCTGGTCGGT GCAGGGCCAG ATCGACCTGC ACGGCTACAC CCGCGATCAC 
GCCCGCGAGG CGCTGGCGGC GTTTCTGGCC GACGCCGGCA AACGTGGCTG GCGCTGCGTG 
CGGGTGGTGC ACGGCAAGGG GCTGGGATCG CCGGGCCGCC AGCCGGTGCT CAAGGGCAAG 
GTACGCAGCT GGCTGGTGCA GCGACAGGAG GTGCTGGCCT TCACGCAGGC GCGCGGGCCC 
GATGGCGGCG CCGGGGCGCT GATCGTGCTG CTCGACAGCG CGCCGCGGCG CGCGCGCCAG 
CGGCCGCAAG CGGGCGTCTG A
 
Protein sequence
MRPQGRHGWA DLDQIGRQLR EQRIAAEQAA ARERAEAAAR QREKELFVRS IGAVIPMPPS 
DRADMARPRP APLPLQRELD DVMVLRSSLS DDFDAESLLE TDDQLSYRRV GLGPDVLKKL 
RLGRWSVQGQ IDLHGYTRDH AREALAAFLA DAGKRGWRCV RVVHGKGLGS PGRQPVLKGK 
VRSWLVQRQE VLAFTQARGP DGGAGALIVL LDSAPRRARQ RPQAGV