Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0689 |
Symbol | |
ID | 6164097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 739946 |
End bp | 740944 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641663440 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001789729 |
Protein GI | 171057380 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCAC GCCGCCACGC CCTCACGCCC GAAGCCCTGG AGATGATGGA CACCATCGCG CGCACCGGCA GCTTCGCCGC GGCCGCGCGC GAACTGGGCA AGGTGCCGTC GGCGCTGACC TACAGCGTGC GCCAGCTCGA GGAGGCGCTC GACGCGCTGC TGTTCGACCG CCGCTCGCGC CAGGCCCAGC TCACGCCGGC CGGCGACGAG CTGCTGCGCG AGGGCCGCCG CCTGCTGCAG CAGATCGACA CGGTGGCCAA CCGGGTGCAG CGTGTGGCCA ACGGCTGGGA GACCGAGCTG GCGATCGCGG TCGACAACAT CGTGGCGCCG GCCGCGCTGT TCGACCTGAT CGACGCCTTC TTCACGCTGC CCAGCGGCGT GGGTGACGAC ACCGTCGCGA CCGGCCAGAC CGCCTCCGGC CACCGCGGCC CGCCGACCCG CCTGAAGCTG CTCGACGAAG TCATGGCCGG CACTTGGGAG GCGCTCGTCA CCGGCCAGGC CGACCTGGCG ATCGGCGTGA CGCTGCCCGG TGCGGCCTTC GAGGACATCC AGACCGCGGT GCTGGGCCCG CTGCGCATGG TGATGGCGGT GGCGCCGCAC CACCCGCTGG CGCGCGAGGC GGCGCCGCTG TGTTCGGACA CCATCGCCCG CCACCGCATC GTCGCCATCG CCGACAGCGC CAAGCGCCAC GATCCGATCA CCGTGGGCGT GCAGGCCGGC CAGGACGTGC TGACCGTGCC GTCCGTGGCC GCCAAGCTCG AGGCCCAGCT GCGCGGCCTG GGTTGTGGCC GCCTGCCCGA AAACCTGGTG CGCCGCCACG CCGAAGCCGG CCGTCTGGTG GTGCTCGAGA CCGAAGAGCC GCCGCGCGAG ATCGAGCTGC ACTACGCCTG GCGGCGCAGC GCGGCGCAGG GGCGGGCGCT CGGCTGGTGG TTGTCGCAGC TCGAAAGCGT CACCACGCGG CGTGCGCTGA TGGAGCAGCA CGCCGGCCTG CTGCTCTGA
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Protein sequence | MTPRRHALTP EALEMMDTIA RTGSFAAAAR ELGKVPSALT YSVRQLEEAL DALLFDRRSR QAQLTPAGDE LLREGRRLLQ QIDTVANRVQ RVANGWETEL AIAVDNIVAP AALFDLIDAF FTLPSGVGDD TVATGQTASG HRGPPTRLKL LDEVMAGTWE ALVTGQADLA IGVTLPGAAF EDIQTAVLGP LRMVMAVAPH HPLAREAAPL CSDTIARHRI VAIADSAKRH DPITVGVQAG QDVLTVPSVA AKLEAQLRGL GCGRLPENLV RRHAEAGRLV VLETEEPPRE IELHYAWRRS AAQGRALGWW LSQLESVTTR RALMEQHAGL LL
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