Gene Lcho_0681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0681 
SymbolrpsP 
ID6160800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp734392 
End bp734652 
Gene Length261 bp 
Protein Length86 aa 
Translation table11 
GC content67% 
IMG OID641663432 
Product30S ribosomal protein S16 
Protein accessionYP_001789721 
Protein GI171057372 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0228] Ribosomal protein S16 
TIGRFAM ID[TIGR00002] ribosomal protein S16 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGTGA TTCGACTCTC CCGCGGCGGC TCCAAGCGGC GCCCGTTCTA CAACATCGTC 
GCTGCCAACA GCGCCAACCG CCGTGACGGC CGCTTCCTCG AGCGAGTGGG TTTCTACAAC
CCGGTCGCTT CGGGTGGTGA AGAAGCCCTG CGCATCGCCT TCGACCGCGT CGAGCATTGG
GTCAGCCACG GCGCCCAGCT GTCGCCGACC GCTGCCCGTC TGGTCAAGCA GGCGCAAGCC
AAGGTCGCTC CGGCTGCCTG A
 
Protein sequence
MVVIRLSRGG SKRRPFYNIV AANSANRRDG RFLERVGFYN PVASGGEEAL RIAFDRVEHW 
VSHGAQLSPT AARLVKQAQA KVAPAA