Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0681 |
Symbol | rpsP |
ID | 6160800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 734392 |
End bp | 734652 |
Gene Length | 261 bp |
Protein Length | 86 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641663432 |
Product | 30S ribosomal protein S16 |
Protein accession | YP_001789721 |
Protein GI | 171057372 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0228] Ribosomal protein S16 |
TIGRFAM ID | [TIGR00002] ribosomal protein S16 |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGTGA TTCGACTCTC CCGCGGCGGC TCCAAGCGGC GCCCGTTCTA CAACATCGTC GCTGCCAACA GCGCCAACCG CCGTGACGGC CGCTTCCTCG AGCGAGTGGG TTTCTACAAC CCGGTCGCTT CGGGTGGTGA AGAAGCCCTG CGCATCGCCT TCGACCGCGT CGAGCATTGG GTCAGCCACG GCGCCCAGCT GTCGCCGACC GCTGCCCGTC TGGTCAAGCA GGCGCAAGCC AAGGTCGCTC CGGCTGCCTG A
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Protein sequence | MVVIRLSRGG SKRRPFYNIV AANSANRRDG RFLERVGFYN PVASGGEEAL RIAFDRVEHW VSHGAQLSPT AARLVKQAQA KVAPAA
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