Gene Lcho_0680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0680 
Symbol 
ID6160799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp733607 
End bp734167 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content70% 
IMG OID641663431 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001789720 
Protein GI171057371 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCCT TTCTGATCCG GCCCGGCGTC GCTGCCGACC TGCCGGCCAT CACCGACATC 
TACGCCTGGA ACGTCGAACA CGGCACCGGC ACCTTCGAGC TCGAGGCGCC CTCGCAAGCC 
GAGATGGCGC ACCGTCGCGA CGACGTGCTG TCCAAGGGGC TGCCCTGGCT GGTGGCGCAG 
CGCGGCGACC AGGTGCTGGG GTATGCCTAC GCCAATCACT TCCGCCCGCG CCCGGCGTTC 
CGTTTCGCGC TCGAGGACTC GGTCTATCTC GCCCCCGCAG CACAGGGCCA GGGGCTCGGC 
ACGCTGCTGC TGGCCGAACT GCTGGCGCGC TGCACGGCGA TCGGTGCGCG GCAGATGTTC 
GCGGTGATCG GCGACTCGGC CAATGCCGGC TCGATCGGCG TGCATCGGCG CTGCGGGTTC 
GCCGAAGTGG GCGTGATGCG CGCGGCGGGC TGGAAGTTCG ATCGCTGGCT CGACGTGGTG 
ATCATGCAAC GCAGCCTGGG CCTCGGCAAC CAGGGCAGCC CGCAGGACTA CGGACCGGCC 
GCTGCCGGAG TCGCCGCATG A
 
Protein sequence
MASFLIRPGV AADLPAITDI YAWNVEHGTG TFELEAPSQA EMAHRRDDVL SKGLPWLVAQ 
RGDQVLGYAY ANHFRPRPAF RFALEDSVYL APAAQGQGLG TLLLAELLAR CTAIGARQMF 
AVIGDSANAG SIGVHRRCGF AEVGVMRAAG WKFDRWLDVV IMQRSLGLGN QGSPQDYGPA 
AAGVAA