| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0678 |
|---|
| Symbol | |
|---|
| ID | 6160342 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | + |
|---|
| Start bp | 732128 |
|---|
| End bp | 733138 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641663429 |
|---|
| Product | phosphate transporter |
|---|
| Protein accession | YP_001789718 |
|---|
| Protein GI | 171057369 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0306] Phosphate/sulphate permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGCTG TCCAGGTGGG GTTCTGGGTC ATCGTGATGC TGGTGCTGCT GGCGGTCGCG
TTCGACTTCA TGAACGGCTT TCACGATGCC GCCAACTCGA TCGCCACGGT GGTTTCCACC
GGCGTGCTCA AGCCGCAGCA GGCGGTGCTG TTCGCGGCGT TCTTCAATGT GGTGGCGATC
GGGATCTTCC AGCTCAAGGT CGCCGCCACG GTCGGCAAGG GCATCGCCGA GCCGGGGGTG
ATCGATCACC ACGTGGTGTT CGGCGCGCTG ATCGGCGCGA TCGTCTGGAA CGTCATCACG
TGGTGGTACG GCATCCCGTC GAGCTCGTCG CACGCGCTGA TCGGCGGCAT CGTCGGCTCG
GTGGTGGCGA AGGCCGGCGC CACGGCGCTG ATCGGCGCGG GCATCTGGAA GACGGTGATC
TTCATCTTCG TGTCGCCGGC GCTCGGCTTC GTGCTCGGCT CGCTGCTGAT GGTGGCGGTG
GCGTGGATCT GCCGGGACAC CTCGCCGCTG CGGGTCGATC GATGGTTCCG GCGGCTGCAG
CTGGTGTCGG CGGGGCTGTA CAGCCTGGGC CACGGCGGCA ACGATGCGCA GAAGACGATC
GGCATCATCT GGATGCTGCT GATCGCCTCG GGTTATGCCT CGGTCAACGA CAAGATGCCG
CCCAACTGGG TGATCTGGAT CTGCTACCTG GCCATCGGTG CGGGCACCAT GTTCGGCGGC
TGGCGCATCG TCAAGACCAT GGGCCAGCGC ATCACCAAGC TCAAGCCGGT GGGCGGCTTC
TGTGCCGAGA CCGGCGGCGC GATCACGCTG TTCATCGCCA CGGCGCTGGG TGTGCCGGTG
TCGACCACCC ACACCATCAC CGGCGCGATC GTCGGCGTCG GCTCGACCCA GCGCGCATCG
GCCGTGCGCT GGGGCGTGGC GGGCAACATC GTCTGGGCCT GGATCTTCAC GATCCCGGCG
TCGGCCGCGG TGGCCGCCGC CGCCTACATG GTCAGCATCA GGCTGTTCTG A
|
|---|
| Protein sequence | MDAVQVGFWV IVMLVLLAVA FDFMNGFHDA ANSIATVVST GVLKPQQAVL FAAFFNVVAI
GIFQLKVAAT VGKGIAEPGV IDHHVVFGAL IGAIVWNVIT WWYGIPSSSS HALIGGIVGS
VVAKAGATAL IGAGIWKTVI FIFVSPALGF VLGSLLMVAV AWICRDTSPL RVDRWFRRLQ
LVSAGLYSLG HGGNDAQKTI GIIWMLLIAS GYASVNDKMP PNWVIWICYL AIGAGTMFGG
WRIVKTMGQR ITKLKPVGGF CAETGGAITL FIATALGVPV STTHTITGAI VGVGSTQRAS
AVRWGVAGNI VWAWIFTIPA SAAVAAAAYM VSIRLF
|
|---|
| |