Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0676 |
Symbol | |
ID | 6160340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 730799 |
End bp | 731287 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641663427 |
Product | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase |
Protein accession | YP_001789716 |
Protein GI | 171057367 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase |
TIGRFAM ID | [TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCGGC TCTACATCGG CCTGGGCGCC AATCTCGGCG ACAGCCGTGC CACGCTGGAA GCCGCTTGCG CAGAGCTGGC GGTGTTGCCC GATTGCCGCT GGGTGGCGCG CTCGGGCTGC TACCGCAGTG CACCGGTCGA CACCAGCGGG CCGGATTTTC TCAACGCCGT GGTGGCGCTC GACTGCCACC TCGATCGCAT CGACGGGCCG CTGCGGGTGC TGCGCGCGCT GCAGGCGATC GAGCTCGGCC ACGGCCGCGA GCGGCCTTTC CGCTACGCGC CGCGCACCCT CGATCTCGAC CTGCTGCTCT ACGGCGACGT GGTGCTCGAC AGCCCCGAGC TGACCGTGCC GCATCCGCGT CTGCACCTGC GGGCGTTCGT GCTGCGGCCC CTGCTCGAAC TGGCGCCTGA CCTGCTGCTG CCCGGCATCG GCCCGGCCCG CAACTGCCTG CCGGCCGTGC TCGATCAGGC GATCGAACGC CTGGCCTGA
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Protein sequence | MHRLYIGLGA NLGDSRATLE AACAELAVLP DCRWVARSGC YRSAPVDTSG PDFLNAVVAL DCHLDRIDGP LRVLRALQAI ELGHGRERPF RYAPRTLDLD LLLYGDVVLD SPELTVPHPR LHLRAFVLRP LLELAPDLLL PGIGPARNCL PAVLDQAIER LA
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