| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0674 |
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| Symbol | |
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| ID | 6160338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 728603 |
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| End bp | 729286 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641663425 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001789714 |
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| Protein GI | 171057365 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0560] Phosphoserine phosphatase |
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| TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCAG AACCCCGCCA CCTCTGTCTT TTCGACCTCG ACGGCACGTT GATCCCGATC
GATTCCGACC ACGCCTTCGG CGAGTTCATG GTCTCGATCG GCTGGGCCGA CGCCGACGAG
TTCCGCCGCC GCAACGATGT CTTCTACGCC GACTACCAGG CCGGCACGCT CGACCTGACC
GCCTACATCG AGTTCGCCAC CGGCGTCTGG CGCAACCGGC CGCTGGCCGA GGCCGAGCAG
GCGCGCGAGC GCTTCATGGC CGAGGTGATC GGCGCCCAGC TGCATCCGGC CGCCTTCGAG
CTGGTGCGCG AGCACCAGGC GCGTGGCGAT CTGGTGGCCA TCGTCACCGC CACCAACGAG
TTCGTGACCA CGCCGATCGC CGCCGCGCTG GGTGTCGAGC ACCTGCTGGC GGTGCAGCTC
GAACGCACCG CCGACGCGGC CTGGACCGGC CGCATCCGTG GTACACCCAC TTTCCGCGAG
GGCAAGGTCG CGCGCGTGCA CGACTGGCTG GCCGGCCTGG GGCACCAGAT CGGCGATTTC
TCCGGCATCA GCGTCTACAG CGACTCTCCC AACGACCTGC CCCTGATGGA ACTTGCCACC
GAGCCGGTGG CCACCAACCC GAGTCCCGCA CTCGAAGCCA CCGCGGTCGA ACGCGGCTGG
CGCATCCTGC GGCTGTTCCC ATGA
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| Protein sequence | MTSEPRHLCL FDLDGTLIPI DSDHAFGEFM VSIGWADADE FRRRNDVFYA DYQAGTLDLT
AYIEFATGVW RNRPLAEAEQ ARERFMAEVI GAQLHPAAFE LVREHQARGD LVAIVTATNE
FVTTPIAAAL GVEHLLAVQL ERTADAAWTG RIRGTPTFRE GKVARVHDWL AGLGHQIGDF
SGISVYSDSP NDLPLMELAT EPVATNPSPA LEATAVERGW RILRLFP
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