| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0673 |
|---|
| Symbol | |
|---|
| ID | 6160337 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | + |
|---|
| Start bp | 727929 |
|---|
| End bp | 728606 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641663424 |
|---|
| Product | DnaA regulatory inactivator Hda |
|---|
| Protein accession | YP_001789713 |
|---|
| Protein GI | 171057364 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0593] ATPase involved in DNA replication initiation |
|---|
| TIGRFAM ID | [TIGR03420] DnaA regulatory inactivator Hda |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCAGG TGCCGCTGGC CCTGGGCCCC GAGCCCAACT GGCGGCTCGA CACCTTCCTG
CCCGGCGCCA ACGCCCAGTG GCAGCAGGTT TGCGCCGCGC TGGCCCAGCC GCAGCCGGCC
ACGCCGCTCT ACCTCTGGGG CCCGCCGGGC AGCGGCAAGA CCCACCTGCT GCGCGCCGCC
GCCGCGCTGG CGCAGGAGCG CAGCCAGCTG GTCGTCGCGC TCGACTGCAG CGGCGTGCCG
CCCTGGGAAT TCGACGACCA CACCGGCCTG CTGCTGCTCG ACGACTGCGA CCGCTACGAC
ACCCGGCGCC AGCAGGCCGC GTTCGCGCTG TTCGTGCAGG CCACCACGCT GGGCGTGCCG
GTGCTCGCCG CCGGGCGCCT GCCGCCGGTC GACCTGCCGA TCCGCGACGA CCTGCGCACC
CGTCTCGGCT GGGGCCTGGT CTACCAGCTG GTGCCGCCCG GCGAGGATCA CGTGCGCGCC
CTGATGCGCC GCGAGGCCGA TCGCCGTGGC ATCGTGCTGT CCGACGACGT GATCGACTAC
CTGCTCAAGC GCTGCGCCCG CGACCTCAGC CACCTGATGC GCCTGCTCGA CCGGCTCGAC
CAGCAGGCGC TCGCTACCAA ACGTGCCGTC ACGCTGCCGC TGGTGCGCAA GGTGCTCGCA
GAATCCGAAT CCACATGA
|
|---|
| Protein sequence | MRQVPLALGP EPNWRLDTFL PGANAQWQQV CAALAQPQPA TPLYLWGPPG SGKTHLLRAA
AALAQERSQL VVALDCSGVP PWEFDDHTGL LLLDDCDRYD TRRQQAAFAL FVQATTLGVP
VLAAGRLPPV DLPIRDDLRT RLGWGLVYQL VPPGEDHVRA LMRREADRRG IVLSDDVIDY
LLKRCARDLS HLMRLLDRLD QQALATKRAV TLPLVRKVLA ESEST
|
|---|
| |