| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0663 |
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| Symbol | |
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| ID | 6163896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 717042 |
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| End bp | 718265 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641663413 |
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| Product | ammonium transporter |
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| Protein accession | YP_001789703 |
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| Protein GI | 171057354 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAAC TGATCAACCT CGCCTGGGTC GGGATATGCA CCGCTTTGGT GTTTTTCATG
CAGGCTGGAT TTGCCTTGGT CGAAGGTGGC CTGGCGCGCG CCAAGAACTC GGTCAACGTG
ATCATGAAGA TCTACCTCGG CACCTGCTTC ATCGGTGTCG GGTTCTGGCT GGTGGGCTAC
GGCGTGGCGT TCGGTCCGAG CGTGGGCGGC CTGTTCGGCG GCGCGGGTTA CGCGCCGATG
GAACTGCCGG CCACCCAGGC CATGAGCCTG CTCTACCAGA TGATGTTCGC CACCACCGCC
GTGACGATCG TCTCGGGCGC GGTGGCCGAG CGCATGCGCT ACGGCGCCTA CCTGTTCTTT
GCCGTCCTGA TGTCGCTGCT GATCTATCCG GTCTACGCGC ACTGGTCCTG GAACGCCGAC
GGCTGGCTCA AGCAACTGGG CTTCGTCGAC TTCGCCGGTG ACGGCGCGGT GCACTCGATC
GGCGCCTGGT GCGCGCTGGC CGGCGTGATG GTGCTCGGGC CGCGCCTGGG TCGCTTCAGC
AAGAAGGGCG AGGTGCGCGA GATCCCCGGC CACAACCTGC CGATGGTCGC GCTCGGCGGC
TTCGTGCTGT GGCTGGGCTG GTTCGGCTTC AACGGCGGCA GCATCAGCGG CCTGGAGAGC
GCCAACCTCG GCACGGTCCT GCTCAACACC TACCTCGGCG CCTGCGCCGG CGGCATCGGC
GCGCTGGCGT TCATGAAGCT CACCGGCCGC CCGGTGCTGA TGAGCGCCTC GGTCAACGGC
AGCTTGTGCG GCCTGGTGGC GATCACCGGC GGCGCGGCCA CGCTCAACCC GCTGACGGCC
ACGCTGGTCG GCATGATCGG CGGCGCGCTG TGCACCTGGG GCGCGGAAAA GATCCGCAGC
TGGCGCATTG ACGACGCGGT CGATGCGATC GCCGTGCACG GCATCGGCGG CGTCTGGGGC
CTGATCGCCA CCGGCCTGTT CTATCAGGGC GACATGTTCA ACGGCCAGCG CGTCCTGGTG
CAGGCGCTGG GCGCCTTCAT CGCGTTCGCC TGGGCCTTCC CGATGGCCTA CGCCTGCTTC
AAGCTGATCG ACCGCTTCGC CGGCCTGCGC GCGCCGACGC TCAACGAACA GCGGGGCCTC
GACTACACCG AGCACCACGA GATCGCGTAC CCTGAGTTCC AGGACTCACC GGCGCAGTTG
CGCATGGAGG CACGTGATGC TTGA
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| Protein sequence | MNELINLAWV GICTALVFFM QAGFALVEGG LARAKNSVNV IMKIYLGTCF IGVGFWLVGY
GVAFGPSVGG LFGGAGYAPM ELPATQAMSL LYQMMFATTA VTIVSGAVAE RMRYGAYLFF
AVLMSLLIYP VYAHWSWNAD GWLKQLGFVD FAGDGAVHSI GAWCALAGVM VLGPRLGRFS
KKGEVREIPG HNLPMVALGG FVLWLGWFGF NGGSISGLES ANLGTVLLNT YLGACAGGIG
ALAFMKLTGR PVLMSASVNG SLCGLVAITG GAATLNPLTA TLVGMIGGAL CTWGAEKIRS
WRIDDAVDAI AVHGIGGVWG LIATGLFYQG DMFNGQRVLV QALGAFIAFA WAFPMAYACF
KLIDRFAGLR APTLNEQRGL DYTEHHEIAY PEFQDSPAQL RMEARDA
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