| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0661 |
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| Symbol | |
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| ID | 6163774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 715010 |
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| End bp | 716188 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641663411 |
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| Product | hypothetical protein |
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| Protein accession | YP_001789701 |
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| Protein GI | 171057352 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3170] Tfp pilus assembly protein FimV |
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| TIGRFAM ID | [TIGR03504] FimV C-terminal domain
[TIGR03505] FimV N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCAC CCCTTCCGCG TCGTCTCATC ACCCTGGCCC TGGCCGCCTT GCCCTGGCTG
CCGGTGGCGC ACGCCCAGGC GCCCGAGGTG GCTGCAGCAG CGTCGGTTTC GGCGTCCGCA
CCGGGCCCGC GCCTGACGAT TCCGCGCGAC ACGCTCTGGA ACATCGCGGC CACGCTGGTG
CCGGGGCGTG AGCCGTCGCG GCCGCAGGTG ATGGTGGCGA TCCTGCGCGC CAACCCGGAC
GCCTTCCTGC ACGGCAACAT GCACCGCCTG CGGCAGGGCG TGTCGCTGCT CATCCCGCCG
CTCGAGGCGA TGCGTGCCGA GCCCGCGGCC AAGGCCGCGG CACTGGTGGA TGCGCATCTG
GCGGCGGCGA GCGCACTGCT GCCGGGAGCG GTGCCCGCGC TGGAGCCCCT GCCGGGCGCT
GCCGCGGTGC AGGCGCGGCC GGCTGTTCCT GCCCCTCCGG TCCCTCCGAT CGCGCCCCCG
ATCGCCCCTG CCGTTCCCGC CGTGCCGGTC GCCAAGGCCG CTTCGGCAGC AGCGCCTGCC
GCGTCGGTGC CGGCCGTGCA GCCTGTCCCG CCCGCTGCGT CCGCGGTGCG CCCGGTTCCG
CCGGTGGCGG TCGTGGCGTC GGCGCCGGCC GCGGCCTCGA TGCCGGCAGC CACGGTGCCC
GCGCCGTCGC CGGCGTCGGC GCCCGAACCG ATCCGCGCAA CCCCACCCGC CGCTGCCAGC
GCGCCTGTGC CGATGGCCGC TGCGCAGCAG CCGCTGCCGA CCCGCTGGCT GCCCTACGCG
ATGCTGGTGG TGCTGGTGGG CACGGCGGTC GTTCTGTGGA TACGGCGCCG GCCGGTGAAG
AAGGAGGACG CGCTGCCGTC GTCCTTCGTC GACGAGCAGG GCGTGCAGCG GCGTCGGCGC
CCGAAGGTGC TGGATGTGTC GCAGGCCGCG GCCGACATGG CGCGCGTGGT CGAGACCCTG
CAGCCTGCCG TCCGGCTCGT CAGCGGCGGT GCGGCGGCGC CGGTGTCCGG TGACCCGGCC
GACCCGCGTG CGCAAGCAGC CCTCAAGCTC GACCTGGCGC GTGCCTGCAT GGAAGTGGGC
CGCAAGGAGT CGGCCCGTGC CCTGCTGCTG GCCGTGAGCC AGGAGGGCAG CCTCGACCAG
CAGGCCGACG CGGCTGAGCT GATGGCGCGT CTGGCCTGA
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| Protein sequence | MIAPLPRRLI TLALAALPWL PVAHAQAPEV AAAASVSASA PGPRLTIPRD TLWNIAATLV
PGREPSRPQV MVAILRANPD AFLHGNMHRL RQGVSLLIPP LEAMRAEPAA KAAALVDAHL
AAASALLPGA VPALEPLPGA AAVQARPAVP APPVPPIAPP IAPAVPAVPV AKAASAAAPA
ASVPAVQPVP PAASAVRPVP PVAVVASAPA AASMPAATVP APSPASAPEP IRATPPAAAS
APVPMAAAQQ PLPTRWLPYA MLVVLVGTAV VLWIRRRPVK KEDALPSSFV DEQGVQRRRR
PKVLDVSQAA ADMARVVETL QPAVRLVSGG AAAPVSGDPA DPRAQAALKL DLARACMEVG
RKESARALLL AVSQEGSLDQ QADAAELMAR LA
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