| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0650 |
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| Symbol | |
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| ID | 6163396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 704383 |
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| End bp | 705405 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641663400 |
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| Product | electron transport protein SCO1/SenC |
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| Protein accession | YP_001789690 |
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| Protein GI | 171057341 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 74 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTCTT TCAGCCTCAG GCACTGGCCC TTGCTCGGTG GCATCGCGGT GGCTGCCGGG
GTGGCGCTGG CCGCCTCGTT CTGGCTCCAG CCCCATGAAG CCGTTGCCGC CGCTTCCAAC
CAGACCGGCG GTGAAGTCTG GGGCGCCAAC TACTTTCCGA ACGTCGTCCT GACCGACCAG
GACGGCAACA AGGTGCGGTT CTTCGACGAC CTGGTCAAGG GCAGGATCGT CGCGATCAAC
ACCTTCTTCA CCAGCTGCTC GGCCAGCTGC GGGCTGGAGA CCGCGCGCAT GCGCGAGGTC
CAGCAGCTGC TCGGCGACCG GGTCGGCAAG GATGTGTTCT TCTACTCGAT CACGATCGAC
CCGCTGACCG ACGGGCCGGC CGAGATGAAG GCCTATGCCA AGCGCTTCAA CGTCGGTCCG
GGCTGGCGTT TCCTGACCGG CAGCGTCAAG GACACCGAGC TGCTGCGCCG CAAGCTCGGT
CTCTACGACG ACAAGGACGC CGCCAATCCG AACAAGAACG ATCACATGCT GCATTCGGTG
ATCGGCAACC AGGCCACCGG CCGCTGGATG CGGGCCTCGC CGTTCGAGAA CCCGGTCGTC
ACCGCCACCC AGATCGGCAC CTGGCTCAAC AACTACAAGC TGCCGCCCTC GAAGGACACC
GCCTACGCGC TGGCGCCGCA GCTGCTGCGC AACATCTCCG ACGGCGAGAA GCTGTTCCGT
ACCCGCTGCG CCTCGTGCCA CAGCGTGAAC GCGGGCGACA AGTCGATGGC GGCGATGCAG
AAGGTCGGGC CCGACCTGCA GGGCGTCGGC CAGCGCCGCC CGCGCGCCTG GCTGGAGCGC
TGGCTCAAGG AGCCCGACGT GATGCTGGCC CAGAAGGATC CGATCGCCGT CGCGATCTAC
AACCAGTACA ACAAGGTGGC CATGCCCAAC CTGCGGCTCG ACTCGAAGCA GATCGCGCAG
CTGCTGGAAT TCATCGACGA AGAAAGCGCC TTGCCGGCCG GCGAAAAGCG CATCAAGCAG
TGA
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| Protein sequence | MRSFSLRHWP LLGGIAVAAG VALAASFWLQ PHEAVAAASN QTGGEVWGAN YFPNVVLTDQ
DGNKVRFFDD LVKGRIVAIN TFFTSCSASC GLETARMREV QQLLGDRVGK DVFFYSITID
PLTDGPAEMK AYAKRFNVGP GWRFLTGSVK DTELLRRKLG LYDDKDAANP NKNDHMLHSV
IGNQATGRWM RASPFENPVV TATQIGTWLN NYKLPPSKDT AYALAPQLLR NISDGEKLFR
TRCASCHSVN AGDKSMAAMQ KVGPDLQGVG QRRPRAWLER WLKEPDVMLA QKDPIAVAIY
NQYNKVAMPN LRLDSKQIAQ LLEFIDEESA LPAGEKRIKQ
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