| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0637 |
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| Symbol | |
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| ID | 6160183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 687723 |
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| End bp | 689129 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641663387 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001789677 |
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| Protein GI | 171057328 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACGCGC GAAAGATTGC AGCCTTCGCC GTCGGGCCGA TCGGCTCCGC GGCGCTCGGT
CTGCTCATCG TTCCGTTCAC CGCCTGGTAC TTCCCTGCAG AAGACGTGGG CCGGATCGCC
ATGCTCCAAG TGGCGATCAG TTTCTGCCTG CTGCTGTTCA GCCTGGGTTT GGACCAGGCC
TACGTGCGGG AATTCCATGA GAGCGCGGAC AAGGCTGCCC TCCTGAAGCG CTGTGTCTGG
CCTGGCCTGA GCCTGCTGAC ACTCAGCCTC CTGACTCTGT TGGCATGGCC GTCTGCGCTG
TCGAAACTCC TGTTTGATCT TGAGAGCGCG ACCGCTAGTG CGATTGTGGC GGCGTGCCTA
GTCTGTGCTT TCCTAGGGCG GTTTATCGCG CTCGTTGTAC GGATGGAGGA GCGAGGCCTT
ATTTTTTCGT TTAGCCAAAT TCTTCCAAAG CTTTCTGTCC TAGCTTGTTT GACGTTCTTT
GTCATCGGCT CCACCCAACG TCAACTAACT CAACTCCTCA TCGCGAATGC GATATCGCTA
CTGTCTGTTG TAGTCGTGAT TGGCTGGATG ACCCGCAAAT CTTGGATGAG TGCGACTATA
TGTGACACAC CATCAAGAGT CATACCCCTG CGCCAATTAC TTCATTTCGG CTCCCCACTT
ATTTTAAGCG GAGTTGCATT TTGGGGAATG ATTTCGTTGG ATCGTATATT CCTTAAAGAA
CTGTCAACCT TTGAATCACT TGCCAGTTAC TCAATAGCCG CCAGCTTTGC TGGTATTGCT
GTGATCATTC AGAGCATTTT CTCGACGATC TGGGCTCCGA TGATCTACAA AAAGAGTTCG
GATGGAGTGG ACCCAATTCT TATCGAGAAA ATGGTCAGCA CAATCCTTTC AGTGGTTGTC
GTAATATTCG CGACATCAGG GCTACTCTCT TGGATTATTA AAACAATACT TCCACCACAA
TATATCGACG TTCAGTTTAT TTTAGTGGCC TGCCTCGGAT ACCCACTTCT TTACACATTG
AGCGAAGCCA GCGGAATTGG GCTTGGTATC ACCCGCAGAA GCCGAGAAAC AATGATCGCC
GCAGTCGCAG CGCTAGTAGT AAACGGCATC GCAAATTTTC TACTTATTCC AAATTTTGGC
GCACAAGGTG CGGCAAGCGC AACCGCCATT TCATTCCTAG CTCTATTGAT ATTAAGGACA
GAAATGGCAA AACGAGCATG GATCAATTTC AACACCACCA CACTTTACCT AATGTCTAGC
ACTTGCACGG CGCTATCCGT CGCAACGGCT CTGTACGGGA AACAACTTGA AGCACCCCTG
CAGATCTGCT GGATAGTAAT GCTAGCCATG GGAATTAATC AACTAAGAAA AAAACTTCCG
CGCTTTTCAA AAAGCGTCAA CCGATAA
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| Protein sequence | MNARKIAAFA VGPIGSAALG LLIVPFTAWY FPAEDVGRIA MLQVAISFCL LLFSLGLDQA
YVREFHESAD KAALLKRCVW PGLSLLTLSL LTLLAWPSAL SKLLFDLESA TASAIVAACL
VCAFLGRFIA LVVRMEERGL IFSFSQILPK LSVLACLTFF VIGSTQRQLT QLLIANAISL
LSVVVVIGWM TRKSWMSATI CDTPSRVIPL RQLLHFGSPL ILSGVAFWGM ISLDRIFLKE
LSTFESLASY SIAASFAGIA VIIQSIFSTI WAPMIYKKSS DGVDPILIEK MVSTILSVVV
VIFATSGLLS WIIKTILPPQ YIDVQFILVA CLGYPLLYTL SEASGIGLGI TRRSRETMIA
AVAALVVNGI ANFLLIPNFG AQGAASATAI SFLALLILRT EMAKRAWINF NTTTLYLMSS
TCTALSVATA LYGKQLEAPL QICWIVMLAM GINQLRKKLP RFSKSVNR
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