Gene Lcho_0628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0628 
Symbol 
ID6159971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp675375 
End bp675965 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content64% 
IMG OID641663378 
Producthypothetical protein 
Protein accessionYP_001789668 
Protein GI171057319 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACATG CGCAAGTGGC CAGCCGATTC GATCTGGCCG GTTTCCTGGC CTGGGAGGCC 
GAGCAGCACG ATCGCCACGA ATGGGTCGAC GGTGAGGTGT TCGCCATGAC CGGGGCGCGC 
GATGCGCACA ACCGGATCGC CGGCAATCTG TATGTGGCAC TGAGAAATTC GTTGCGCGGC 
ACGCCATGCC GCACTTTCAT GTCCGACATG AAGGTGTACA TCGAAACCGC CGACGCCGTG 
GTCTACCCCG ACGTGTTCGT CACCTGCGAC CCACGTGACC GCAGCACCGA AGCGGATCTC 
GCCAAGCGTC ATCCGACACT GGTGGTCGAA GTGATCAGCA ACAGCACCGG CGCTTACGAC 
CGCGGGCGCA AGTTCGAGTT GTATCGCAGC CTGGCGAGCT TGCAGGAAGT GCTGTTTGTC 
GAGCAGGACC GCATGCAGGT GGACCTGTTC CGCCGCAACG ACGATGGCCA CTGGGTGCTG 
TATCCGGCTG GCGAGGCAGA CGCGATCGAA TTGACCAGCC TGGGCCAGAC CCTGAGCGTG 
GCCAGCATCT ACGAAGACGT GCTGCCGGCC GCCGAAGAGC CGCCGGCCTG A
 
Protein sequence
MGHAQVASRF DLAGFLAWEA EQHDRHEWVD GEVFAMTGAR DAHNRIAGNL YVALRNSLRG 
TPCRTFMSDM KVYIETADAV VYPDVFVTCD PRDRSTEADL AKRHPTLVVE VISNSTGAYD 
RGRKFELYRS LASLQEVLFV EQDRMQVDLF RRNDDGHWVL YPAGEADAIE LTSLGQTLSV 
ASIYEDVLPA AEEPPA