| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0616 |
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| Symbol | |
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| ID | 6160099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 663537 |
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| End bp | 664334 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641663366 |
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| Product | putative transmembrane protein |
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| Protein accession | YP_001789656 |
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| Protein GI | 171057307 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0313] Predicted methyltransferases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0127527 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGTGCTG ATCTGCCTTC CGGAGCCAAG AGTCCCGGGC GCCTCTATCT CGTGCCCAAC
ACCCTGGATC TCGGCACGTT CGGGGACGCC GCCGTGCCCG ACCTGCAGGA GGTGCTGCCG
CTCGGTGCCC TGCGGGTTGC TGCCGGCCTG AGTCATTGGG TGGTTGAAAA CGCCCGCAGC
GCGCGCGCCC TGCTGAAGCG GATCAACGCC GTGGTGCCGC TGGCGCAGCC GCTGCAATCG
CTGTCGATGA CGGAGTTGCC GCGGCCCGTC AAGGGGGGCG GCAAGCCGGT GGACAAGACG
CCGTGGCGTG AACTGCTGTC GCCCGCCTTG GCGGGACATG ACATCGGCTT GCTGTCGGAG
GCCGGGCTGC CGGCCGTGGC CGATCCGGGT GCCCGGCTGG TGCTCGAGGC GCACGCCTGC
GGCGTGCCGG TCTGGCCGCT GTCCGGGCCG AGTTCGCTGA TCCTGGCCGT CGCGGCCAGT
GGCCTGAACG GCCAGAGCTT TGCGTTTGTC GGTTATCTGC CGACCGATTC GGCAACACGT
GCCGTCAAGC TGCGCGAACT GGAAGCGCAT TCGCGGCGCT TGCAACAGAC GCAGCTGCTG
ATCGAGACGC CCTATCGCAA TGCCGCTCTG CTGGATGGGC TGCTGGCAAC GCTTGCGCCG
CAGACCTGGC TCAACATCAG TTGCGGCCTG ACGCTGGCTG GTGGCTTCAG CCAGACTCGG
CGCATCGCGC AGTGGCGCGA GAGCGACACG CGTCTGCCGG CTGACCGGCC GGCGGTCTTC
TCGTTTCTGG CTGGATGA
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| Protein sequence | MGADLPSGAK SPGRLYLVPN TLDLGTFGDA AVPDLQEVLP LGALRVAAGL SHWVVENARS
ARALLKRINA VVPLAQPLQS LSMTELPRPV KGGGKPVDKT PWRELLSPAL AGHDIGLLSE
AGLPAVADPG ARLVLEAHAC GVPVWPLSGP SSLILAVAAS GLNGQSFAFV GYLPTDSATR
AVKLRELEAH SRRLQQTQLL IETPYRNAAL LDGLLATLAP QTWLNISCGL TLAGGFSQTR
RIAQWRESDT RLPADRPAVF SFLAG
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