| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0612 |
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| Symbol | |
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| ID | 6159859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 660781 |
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| End bp | 661872 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641663362 |
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| Product | putative glycerol-3-phosphate acyltransferase PlsX |
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| Protein accession | YP_001789652 |
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| Protein GI | 171057303 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0416] Fatty acid/phospholipid biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00182] fatty acid/phospholipid synthesis protein PlsX |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0000213414 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAACGCC CTGTTCGCCT GTCGGTGGAC TGCATGGGTG GCGATCACGG TCCGTCGATC
ACATTGCCGG CCTGCCGCAC CTTTCTCGAC AAGCATCCCG ATGCCGAACT GCTACTGGTC
GGCAAGCCTG ATGCACTGAC TGCCGCGGCC TCATGGTCGC GCTGCCGCAT CGTGGCCGCG
TCGGAGGTGG TCGAGATGGA CGATCCGATC GACATCGCGC TGCGCAAGAA GCGCGATTCG
TCGATGCGGG TGGCCATCCA GCAGGTCAAG GCCGGCGACA CCCCGCCGGC AGCCGATGCC
TGCGTGTCGG CCGGCAACAC CGGCGCCTTG ATGGCCGTGG CGCGCTACCT GCTGAAGACG
CTCGACGGCA TCGATCGGCC CGCGATTGCC AGCGTGATGC CCAACACGCG AGATGGTTTC
ACCACCATGC TCGACCTGGG CGCCAACGTC GATTGCACGG CCGAGCACCT GCTGCAGTTT
GCCGTCATGG GCAGCGCCCT GGTGTCGGCG GTCGACGGCA AGGAGACCCC GACGGTCGGC
CTGCTGAACA TCGGCGAAGA AGCCATCAAG GGCAGCGAGG TCATCAAGCG CGCCGGCGAA
CTGCTGCGTG CGGCGGGTGA GTCGGGCCTG ATCAACTTCC GCGGCAACGT CGAAGGCAAC
GACATCTTCA AGGGCACCAC CGACCTGGTG GTCTGCGACG GTTTCGTCGG CAACGTGGCA
CTCAAGACGG CCGAAGGTCT GGCAACGATG TTGTCGACCT TCATCAAGCA GGAGTTCACG
CGCACGCCCT ACGCCAAGCT CGCCGCGCTG GTGGCCCTGC CGGTCCTGAA ACATTTCAAG
GATCGCGTCG ATCACCGCCG CTACAACGGC GCGGCCCTGC TCGGGTTGCG CGGCCTGGTG
TTCAAGAGCC ACGGCTCGGC CGACGCACTG GCCTTCGAGA CGGCGCTCAC CCGCGCGTAT
GATGCCGCCC GCAACGGGCT GCTCGAACGG GTGCATGAGC GCATCAACTT CGCCTTGCAG
GCTTCGCTGA ACACAAACCC CGCGAATGCC AATCGAGCGG CCGAGGCCCC CGCACCGCGC
CAAGCTGCAT GA
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| Protein sequence | MQRPVRLSVD CMGGDHGPSI TLPACRTFLD KHPDAELLLV GKPDALTAAA SWSRCRIVAA
SEVVEMDDPI DIALRKKRDS SMRVAIQQVK AGDTPPAADA CVSAGNTGAL MAVARYLLKT
LDGIDRPAIA SVMPNTRDGF TTMLDLGANV DCTAEHLLQF AVMGSALVSA VDGKETPTVG
LLNIGEEAIK GSEVIKRAGE LLRAAGESGL INFRGNVEGN DIFKGTTDLV VCDGFVGNVA
LKTAEGLATM LSTFIKQEFT RTPYAKLAAL VALPVLKHFK DRVDHRRYNG AALLGLRGLV
FKSHGSADAL AFETALTRAY DAARNGLLER VHERINFALQ ASLNTNPANA NRAAEAPAPR
QAA
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