Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0611 |
Symbol | |
ID | 6159858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 659792 |
End bp | 660784 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641663361 |
Product | 3-oxoacyl-(acyl carrier protein) synthase III |
Protein accession | YP_001789651 |
Protein GI | 171057302 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00000255652 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCACCC ACCTGCCCCG TTATTCGCGC ATCACCGGAA CCGGCAGCTC GCTGCCGCCG CGTCGACTGT CCAACGCCCA GCTGACCGAA GAACTCGCTG CGCGTGGCAT CGAGACGTCG GACGAATGGA TCGTCGAGCG CACCGGCATC CGCGCGCGCC ACTTCGTCGA TGCCGGCGTC AATTCGAGCG ACCTGGCGGT CGAGGCGGGG CGTCACGCCA TCGAATCGGC CGGCCTGCAG CCGTCCGACA TCGACCTGAT CATCGTCGCC ACGTCGACGC CGGACATGGT GTTCCCGTCC AACGCCTGCA TCGTCCAGCG CAAGCTCGGC ATCGTCAACG GCGCGCCGGC TTTCGACGTG CAGGCGGTGT GCTCGGGCTT CATCTACGCG ATGACGATGG CCGATGCGCT GATCCGCACC GGCAGCGCCC GCAACGCCCT GGTGATCGGC GCCGAGGTGT TCTCGCGCAT CCTCGACTTC ACCGACCGCA CCACCTGCGT GCTGTTCGGC GACGGCGCGG GCGCGGTGGT GCTGTCGGCC AGCGACACCC CCGGCATCCT GGCCACCGAC ATGCACGCCG ATGGCCGGCA TGTCGAGATC CTGTGCGTGC CCGGCACCGT CTCGGGCGGG CAGATCCTCG GCGATCCGCT GCTCAAGATG GACGGCCAGG CGGTCTTCAA GCTGGCCGTG GGCGTGCTCG AAAGTGCCGC GCGGGCCGTG CTGGCCAAGG CCGGCAAGGA CAGCAGCGAC ATCGACTGGC TGATCCCGCA CCAGGCCAAC ATCCGCATCA TGCACGGCAC GGCGCGCAAG CTGAAGCTGC CGCTGGACAA GCTGATCGTC ACGGTCGACG AGCACGGCAA CACGTCGGCC GCATCCATCC CGCTGGCGCT CGACCAGGCG GTGCGCAGCG GTCGCGTCCA GCGCGGCCAG ACCCTGATGC TCGAAGGCGT CGGCGGCGGC TTCACCTGGG GCGCCGTACT CGTCGAGTTC TGA
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Protein sequence | MTTHLPRYSR ITGTGSSLPP RRLSNAQLTE ELAARGIETS DEWIVERTGI RARHFVDAGV NSSDLAVEAG RHAIESAGLQ PSDIDLIIVA TSTPDMVFPS NACIVQRKLG IVNGAPAFDV QAVCSGFIYA MTMADALIRT GSARNALVIG AEVFSRILDF TDRTTCVLFG DGAGAVVLSA SDTPGILATD MHADGRHVEI LCVPGTVSGG QILGDPLLKM DGQAVFKLAV GVLESAARAV LAKAGKDSSD IDWLIPHQAN IRIMHGTARK LKLPLDKLIV TVDEHGNTSA ASIPLALDQA VRSGRVQRGQ TLMLEGVGGG FTWGAVLVEF
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