Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0607 |
Symbol | |
ID | 6159885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 656341 |
End bp | 657585 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641663357 |
Product | 3-oxoacyl-(acyl-carrier-protein) synthase 2 |
Protein accession | YP_001789647 |
Protein GI | 171057298 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000000000170362 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACTCGTC GCCGTATCGT CGTGACCGGA CTTGGCATTG TTTCCCCGAT CGGGAACACG GTTGCCGAGT CCTGGGACAA CCTGATCGCT GGCCGTTCCG GCATCGACCA CGTCACCCGC TTTGACGCGG CCAATCTGGC CGTGCGCTTC GCTGGCGAAG TCAAAGGCTT CAATATCGAG GATTACATCC CCGCCAAGGA AGCCCGCCAC ATGGACGCCT TCATCCACTT CGGCATTGCG GCATCGCTGC AGGCCGTGCG GGATTCGGGG CTGCCCACCG GCGACGCGCT GACCGAGGAG CTGGCCGAGC GCATCGGCGT GATGGTGGGC TCGGGCATCG GCGGCCTGCC GATGATCGAG AACACCCACG ACGAGTACCG CGAGCGTGGG CCGCGGCGCA TTTCCCCGTT TTTCGTACCC GCCTCGATCA TCAACATGAT CTCCGGACAT GTGTCGATCA AGTGCGGCTA CAAGGGTCCC AACCTGGCGA TGGTGACGGC CTGCACCACC GGCCTGCACA GCATCGGCAT GGCGGCACGG ATGATCGCGC ACGGCGATGC CGACGTGATG ATCGCCGGCG GCGCGGAGTC GACCATCTCG CCGCTGGGCA TCGGCGGTTT CGCCTCGGCG AAGGCGCTTT CGACCCGCAA TGACGACCCC AAGGCCGCAT CGCGCCCCTG GGATCGCGAT CGCGACGGCT TCGTGCTCGG CGAAGGTGCC GGCGTGATGG TGGTCGAAGA ATACGAACAC GCCAAGAAGC GTGGCGCCAA GATCTACGCC GAACTGACCG GTTTCGGCAT GACGGGCGAT GCGTATCACA TGACGGCACC CAACGTCGAC GGCCCGCGCC GCTCGATGCA GCTCGCGCTG AAGGATGCCG GCGTCAACGC CTCGGACGTC CAGTTCATCA ACGCCCACGG CACCTCGACG CCGCTGGGTG ACGCCAACGA GACCAACGCG ATCAAGCTCG CGTTCGGTGA CCACGCCAAG AAGCTGGTGG TGAACTCGAC CAAGTCGATG ACCGGCCATC TGCTGGGCGG CGCCGGCGGC ATCGAGTCGA TCTTCACGGT GCTGGGCCTG TACCACCAGA TCTCGCCGCC GACGATCAAC CTGGACAACC AGGATCCGGC CTGCGACCTC GACTACTGCG CCAACACGGC GCGTGAGATG AACATCGAGG TGGCGGTCAA GAACAACTTC GGCTTCGGCG GCACCAACGG CACGCTGGTG TTCCGCCGCG TCTGA
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Protein sequence | MTRRRIVVTG LGIVSPIGNT VAESWDNLIA GRSGIDHVTR FDAANLAVRF AGEVKGFNIE DYIPAKEARH MDAFIHFGIA ASLQAVRDSG LPTGDALTEE LAERIGVMVG SGIGGLPMIE NTHDEYRERG PRRISPFFVP ASIINMISGH VSIKCGYKGP NLAMVTACTT GLHSIGMAAR MIAHGDADVM IAGGAESTIS PLGIGGFASA KALSTRNDDP KAASRPWDRD RDGFVLGEGA GVMVVEEYEH AKKRGAKIYA ELTGFGMTGD AYHMTAPNVD GPRRSMQLAL KDAGVNASDV QFINAHGTST PLGDANETNA IKLAFGDHAK KLVVNSTKSM TGHLLGGAGG IESIFTVLGL YHQISPPTIN LDNQDPACDL DYCANTAREM NIEVAVKNNF GFGGTNGTLV FRRV
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