Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0606 |
Symbol | |
ID | 6159884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 655819 |
End bp | 656313 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641663356 |
Product | hypothetical protein |
Protein accession | YP_001789646 |
Protein GI | 171057297 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000000000916707 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGCACACGG CACCAGCGGT GTCGGTGCAA GTCGATGCCG AGCCGCGCTG GCGGCTTGCA CTGGCGGTGC TCAGCCTGCT CGCGCCGCTG ACCGTGGCGA CATGGTGGGC CTACAGGACC CTGAACAGCG ACACCTGGTG GATCCCCGGA TCCGTCGGCG CGGCGTTGTG CCTCTTCGCC CTGACAGCGT GGGCCGCACG ACAGGGCTGG CAACTGCGCA CGCCCGACTG CCTGTCCATC CAATGGAGCG GCGCCGAGTG GACGCTCGTC GATCGCGGCG GCCGGGCCTC GACCGGCGAT CTGGCCGTGG TGATCGATCT GGGCCACTGG ATGCTGTTGC GCTTCGATCA CCCGCCGAGC ACCCGCCCGG CGTTGCGCCG CAGGGTCTGG ATTCCCGTCG CCGAGCCGCT CGTGCGGCAG CACTGGCACG CGCTGCGCTG CGCGGTGCAT GGCGCCAGGC CTGCCGACCG TGACGGGCGC GACCATGAGC GCTGA
|
Protein sequence | MHTAPAVSVQ VDAEPRWRLA LAVLSLLAPL TVATWWAYRT LNSDTWWIPG SVGAALCLFA LTAWAARQGW QLRTPDCLSI QWSGAEWTLV DRGGRASTGD LAVVIDLGHW MLLRFDHPPS TRPALRRRVW IPVAEPLVRQ HWHALRCAVH GARPADRDGR DHER
|
| |