| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0596 |
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| Symbol | |
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| ID | 6160227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 645522 |
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| End bp | 646292 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641663346 |
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| Product | DNA repair protein RecO |
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| Protein accession | YP_001789636 |
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| Protein GI | 171057287 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
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| TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00201329 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGACCC GCCGTGCCGC GCCGGCCCAG CTCGGGGCCT ATGTGCTGCA CCACCACGAC
TGGAGCGAAT CCAGCCTGAT CCTGGAGCTG TTCACGCGCG AACTCGGCCG CATCTCGGCG
GTGGCCAAGG GCGCCAAGCG GCCGTACTCG CAGCTGCGCT GCGTGCTGCT GCCGTTCCAG
CGTCTGAACA TCGCCCTCGG CAGCAAGCGC ATCGAGGACG GCGCCGAAGT GCAGCTGCTG
CGCAGCGCCG AATGGGCCGG CGGCGGCGCG ATGCCCGGTG GCGCCGCGCT GCTGGCGGGC
ATGCACCTCA ACGAGATCCT GCTGCGCGGC CTGGCCCGGC AAGACCCGCA CCCGCATCTT
TTCGACGCCT ACGCCGCCAC CCTGCCCGCG CTCAGCGGGC CTGACGACGC CGGCGTGGCC
GCGGCGTTGC GCGCTTTCGA GATCCGGCTG CTGTCCGACT CCGGCGTGCT GCCCGAGCTC
CACCTCGTCA CCGCCACCCA GACGCCGGTG CAGGACAACG CCCGCCACAG CCTGAACGCC
GAAGCGGGCG TCTGCGTCGC CGGCCCGCGC GACAGCGGCA TCGCCGGCAG CGCGCTGGTC
GCCCTGCAGG CGGCGCTGCA CGACAGCGAT CTGGCCGCCC TGCAGCGCGC CTGCCTGGCG
GCACCGCAAG AACTGAAGAG CCAGCTGCGC GGCCTGCTTC ACTATCATCT CGGCACCTCG
GCGCTGCGCA CCCGTGCGCT GATGATCGAG GTCCAGCAGC TGCTCGACTG A
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| Protein sequence | MATRRAAPAQ LGAYVLHHHD WSESSLILEL FTRELGRISA VAKGAKRPYS QLRCVLLPFQ
RLNIALGSKR IEDGAEVQLL RSAEWAGGGA MPGGAALLAG MHLNEILLRG LARQDPHPHL
FDAYAATLPA LSGPDDAGVA AALRAFEIRL LSDSGVLPEL HLVTATQTPV QDNARHSLNA
EAGVCVAGPR DSGIAGSALV ALQAALHDSD LAALQRACLA APQELKSQLR GLLHYHLGTS
ALRTRALMIE VQQLLD
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