Gene Lcho_0594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0594 
SymbolacpS 
ID6159703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp644265 
End bp644663 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content68% 
IMG OID641663344 
Product4'-phosphopantetheinyl transferase 
Protein accessionYP_001789634 
Protein GI171057285 
COG category[I] Lipid transport and metabolism 
COG ID[COG0736] Phosphopantetheinyl transferase (holo-ACP synthase) 
TIGRFAM ID[TIGR00516] holo-[acyl-carrier-protein] synthase
[TIGR00556] phosphopantethiene--protein transferase domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0105656 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCTACG GCGTCGGCAC CGACATCTGC GACATCCGCC GCATCGCCGC CACGCTGCAG 
CGGCGCGGCG ACCGCTTCGC CGAGCGGGTG CTGGGGCCAC GCGAGATCGA GGTGTTCCGT 
TATCGCCGCG CCAAGGTCGA GGCGCGTGGC CTGTCGTATC TGGCGACCCG CTTCAGCGCC 
AAGGAAGCGT TCTCGAAGGC GATCGGCCTG GGCCTGCACC AGCCGATGAG CTGGCGCAGC 
TGCGAGATCC TCAACGCACC ATCCGGCCAG CCGCAGATCC ACCTGCACGG CGCGCTGGCC 
GACTGGTTTG CGCAGCGCCG GCTGATCGCC CACGTCAGCC TGACCGACGA AACCGACTAC 
GCCACCAGTT TCGTGGTGGT CGAAACCCAG GGTCTGTAA
 
Protein sequence
MIYGVGTDIC DIRRIAATLQ RRGDRFAERV LGPREIEVFR YRRAKVEARG LSYLATRFSA 
KEAFSKAIGL GLHQPMSWRS CEILNAPSGQ PQIHLHGALA DWFAQRRLIA HVSLTDETDY 
ATSFVVVETQ GL