| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0584 |
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| Symbol | |
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| ID | 6159954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 632534 |
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| End bp | 633943 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641663333 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_001789624 |
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| Protein GI | 171057275 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.110043 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACACCC CCACCCTCAC TTCCACCCCG ACTACCGCCA CGTCCGTGGT CGACGACACG
GCGCCCGCCG CATCCGGCAA GAAGGTCTAC ATCCGCACCT TCGGCTGCCA GATGAACGAA
TACGACTCGG ACAAGATGTC CGACGTCATG GCCGCCGCCG AGGGCTACAC GCCCACCGAC
GACCCGGAGC AGGCCGACCT GATCCTGTTC AACACCTGCT CGGTGCGCGA GAAGGCGCAG
GAAAAGGTCT TCAGCGACCT CGGCCGCGTC AAGCACCTCA AGGCCCGCGG CGTGCTGATC
GGCGTGGGCG GCTGCGTGGC CAGCCAGGAA GGCGCGGCGA TCATCGAGCG CGCACCGTAT
GTCGACGTGG TGTTCGGCCC GCAGACGCTG CATCGCCTGC CGCAGATGCT GGCGCAGCGC
GCCCGTCAAG GCCGTCCACA GGTCGACATC AGCTTCCCCG AGATCGAGAA GTTCGACCAC
CTGCCACCCG CCAAGGTCGA CGGTGCGGCG GCGTTCGTGT CGATCATGGA AGGCTGCAGC
AAGTACTGCT CGTACTGCGT CGTGCCCTAC ACGCGCGGCG AGGAGTTCAG CCGGCCGTTC
GACGAGGTGC TGACCGAGGT CGCCGGACTG GCCGACCAGG GCGTCAAGGA AGTGACGCTG
CTGGGCCAGA ACGTCAACGC CTACCGCGGC CGGATGGGCG ACACGTCGGA CATCGCCGAC
TTCGCCACGC TGCTCGAATA CGTGCACGAG ATCCCCGGCA TCGAGCGCAT CCGCTACACC
ACCAGCCATC CGAACGAGTT CACGCCGGCG CTGATCGAGG CCTACGCCCG CCTGCCCAAG
CTGGTCAATC ACCTGCACCT GCCGGTGCAG CACGGCTCGG ATCGCATCCT GTCGGGCATG
AAACGCGGCT ACACGGTGCT CGAATACAAG AGCACGATCC GCAAGCTGCG CGCGATCCGC
CCCGACATCA GCCTGTCGAC CGACTTCATC GTCGGTTTCC CCGGCGAGAC CGACGACGAC
CATGCCCGCA CCATGAAGCT GATCGACGAC ATCGGTTTCG ACGCGTCGTT CAGCTTCATC
TTCAGCCCGC GCCCCGGCAC GCCGGCCGCC GCGCTGCACG ACGACACGTC GTACGAGGTC
AAGCTCGCGC GCCTGCAGCA GTTGCAGGCG ACGATCGAGG ACAACGTGCG CCGCATCAGC
GAGCGCCGCG TCGGCACGGT GCAGCGCGTC CTGGTCGAAG GCCCGAGCCG GCGCGATCCG
AACGAGCTGA TGGGCCGCAC CGAGTGCAAC CGCATCGTCA ACTTCGACGG CGGCCCGAAC
GCGGCGCGGC TGGTCGGTCG GATGATCGAC ATCCGCATCA CGCTGGCCTA TCCGCACTCG
CTGCGTGGCG AGCCGGTTCT GCGCGACTGA
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| Protein sequence | MHTPTLTSTP TTATSVVDDT APAASGKKVY IRTFGCQMNE YDSDKMSDVM AAAEGYTPTD
DPEQADLILF NTCSVREKAQ EKVFSDLGRV KHLKARGVLI GVGGCVASQE GAAIIERAPY
VDVVFGPQTL HRLPQMLAQR ARQGRPQVDI SFPEIEKFDH LPPAKVDGAA AFVSIMEGCS
KYCSYCVVPY TRGEEFSRPF DEVLTEVAGL ADQGVKEVTL LGQNVNAYRG RMGDTSDIAD
FATLLEYVHE IPGIERIRYT TSHPNEFTPA LIEAYARLPK LVNHLHLPVQ HGSDRILSGM
KRGYTVLEYK STIRKLRAIR PDISLSTDFI VGFPGETDDD HARTMKLIDD IGFDASFSFI
FSPRPGTPAA ALHDDTSYEV KLARLQQLQA TIEDNVRRIS ERRVGTVQRV LVEGPSRRDP
NELMGRTECN RIVNFDGGPN AARLVGRMID IRITLAYPHS LRGEPVLRD
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