| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0576 |
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| Symbol | |
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| ID | 6160145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 625975 |
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| End bp | 626553 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641663325 |
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| Product | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase |
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| Protein accession | YP_001789616 |
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| Protein GI | 171057267 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase |
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| TIGRFAM ID | [TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.32915 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAGCGCAG CAACCTCGCG CCCCCGCCTG GTGGTCGGCA TCACCGGCGC ATCGGGTGCG
ATCTACGGCG TGCGGCTGCT GGACCGGGCC CGCGCACTCG GCGTCGAAAC CCACCTGGTC
GTGACTTCGG CCGGCGTGCT CAACGTGCAC CACGAAATGG GCCTCGGCCG CGCCGAACTC
GAGGCCCGGG CCGATCACCA CCACTCGCCC GGCGAAGTCG GCGCCTGCAT CGCCAGCGGC
AGCTTCAGCA CCGAGGCGAT GGTGATCGCG CCCTGCTCGA TGAAGACGCT GGCGGCGGTG
GCGCACGGTT TCGGCGACAA CCTGCTGTCA CGCGCGGCCG ACGTTACGCT CAAGGAACGC
CGCCGCCTGG TGCTGATGGT GCGCGAGACG CCCTTCAACC TGGCCCACCT GCGCAACATG
GTGGCCGCCA CCGAGATGGG CGCGATCGTC TTCCCGCCGC TGCCGGCCTT CTATCACCGG
CCGCAGAGCA TCGACGAACT GGTCGACGAG ACGGTCGAGC GGGTGCTGCA GATCAGCGGC
ATCGGTCAGG CGAGCCCGAA AGCCTGGGCC GGGCTCTGA
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| Protein sequence | MSAATSRPRL VVGITGASGA IYGVRLLDRA RALGVETHLV VTSAGVLNVH HEMGLGRAEL
EARADHHHSP GEVGACIASG SFSTEAMVIA PCSMKTLAAV AHGFGDNLLS RAADVTLKER
RRLVLMVRET PFNLAHLRNM VAATEMGAIV FPPLPAFYHR PQSIDELVDE TVERVLQISG
IGQASPKAWA GL
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