| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0575 |
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| Symbol | |
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| ID | 6160144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 625278 |
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| End bp | 625949 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641663324 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001789615 |
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| Protein GI | 171057266 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.445014 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGGCGG CCTCGTCGGC CCGCTTGCTC GCTGGCGGTG CCGCCGGCCT GGGTCTGTGG
CCCGCGCTGG CGCAGGCCGG TCGCCAGGCC GAGGAGCCGC TGGCCGATGC GGTGCGCAGC
GCCTTGTCGG CGGCGGTGGC CGACAGCGCC CCGCCGCGGC TGGAGTTTGC GCAGATCGAG
CAGCGCCTGG CGTACCTGCG CTGGCTTGGC ACCACCGGTC AACGGCTGGT GCGGCGCAAA
CCCGATTTCG ACGTGCGGCG CGAGTTTCTC GAGACGCTCT GGTACGAGAG CCGGCGCGCC
GGGCTCGACC CGTCGCTGGT GCTCGGTGTG GTCGAGGTCG AGAGCGGTTT TCGCAAGTAC
GCGATCTCGA GCGCCGGCGC GCGCGGCTAC ATGCAGGTGA TGCCGTTCTG GGCCCGCCTG
ATCGGTGATG GCGACGCCAG CCGGCTGTTC CATCTGCAGA CCAATCTGCG CTTCGGCTGC
GTGATCCTGC GGCACTACCT CGACCGTGAG CGAGGCGACC TGTTCATGGC ACTGGGCCGC
TACAACGGCA GCCGGGGCCA GGCGCCCTAT CCGACGATGG TGCTGGGTGC GCGCAAGCGC
TGGATGCATC CGGACGACGG CCTGCGCACG GCCGGCACTG CTGCCGCGGA CACGGCCAAC
GCGGCACGCT GA
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| Protein sequence | MSAASSARLL AGGAAGLGLW PALAQAGRQA EEPLADAVRS ALSAAVADSA PPRLEFAQIE
QRLAYLRWLG TTGQRLVRRK PDFDVRREFL ETLWYESRRA GLDPSLVLGV VEVESGFRKY
AISSAGARGY MQVMPFWARL IGDGDASRLF HLQTNLRFGC VILRHYLDRE RGDLFMALGR
YNGSRGQAPY PTMVLGARKR WMHPDDGLRT AGTAAADTAN AAR
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