Gene Lcho_0552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0552 
Symbol 
ID6164127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp599447 
End bp600529 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content72% 
IMG OID641663301 
Productserine/threonine protein kinase 
Protein accessionYP_001789592 
Protein GI171057243 
COG category[R] General function prediction only 
COG ID[COG2334] Putative homoserine kinase type II (protein kinase fold) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACA TCGCCCCGGA TGACCTGCCG CCCGCCTACC GCCTGCCCGC TCCACAGCAA 
GCCACCGACG AACAGCCCTA CGCGGGCCTG ACCCCCTACG CGGTGCTCGA CGCGCTCGAC
GCCGCCGGCC TGCGCGGCGA CGGCCGCATC CTGCAGCTCA ACTCCTACGA GAACCGGGTC
TTCCAGGTCC ACCTGGAAGA CGAGCGCGTG GTGGTCGCCA AGTTCTACCG CGCCGCGCGC
TGGAGCGACG CGCAGATCCT CGAAGAACAT CAGTTCGCGC TCGAACTGGC AGCCGCCGAG
GTGCCGGCCG TGCCGCCGCT GGTGCTCGCC GCCGGCCTGG GCATCGAGCC CGCGCCGAGG
CTGCTGGGCA CGCCGCCCAC GCTGGCCGAC TGGCAGGGCT GGCGCTACGC AGCGAGCCCG
CGCTGCGGCG GCCGAGCGCC CGAGCTGGAC GACCCGGCGG TGCTCGAATG GATCGGCCGC
TTCCTGGCCC GCCTGCACCT GGTCGGGCAG GCCCGGCCGT TCGAACACCG CCTGCGGCTC
GACGGCAGCC GCATCGCCCG CGCCGCGGTC GCCTGGCTGT GCGATCAGGA CCTGCTACCA
CCCGATGCGC TCGCCGGCTG GCGCCAGGCC AGCCTGGCCG CGCTCGACCA GGTCGATGAG
CTGTTCACGC GCGCCGGCAA CCTCCAGCTG CTGCGCGTGC ACGGCGACTG CCACGCCGGC
AACGTGCTGT GGACCGACGC CGGCCCGCAC TTCGTCGACC TCGACGATGC CGTGACGGGC
CCGGCCGTGC AGGACCTGTG GATGCTGCTC GGCGGCGAAC GCCACGAGAT GCAGACCCAG
CTCGGCGCGC TGCTCGACGG CTATGAAACG CTGCGCGAAT TCGACCGCCG CGAGCTCGGC
CTGATCGAGG CGCTGCGCAC GCTGCGCATC ATCAACCACA GCGCCTGGAT CGCCCGGCGC
TGGCGCGACC CGGCGTTCCC GATCGCCTTT CCGTCGTTCG AGAGCCCGTC GTACTGGGCC
CAGCAGACCA CCGTGCTGCA CGAGCAGATT GGCGCGATGC AAGGCCCCGC GCTGGTGGCC
TGA
 
Protein sequence
MNDIAPDDLP PAYRLPAPQQ ATDEQPYAGL TPYAVLDALD AAGLRGDGRI LQLNSYENRV 
FQVHLEDERV VVAKFYRAAR WSDAQILEEH QFALELAAAE VPAVPPLVLA AGLGIEPAPR
LLGTPPTLAD WQGWRYAASP RCGGRAPELD DPAVLEWIGR FLARLHLVGQ ARPFEHRLRL
DGSRIARAAV AWLCDQDLLP PDALAGWRQA SLAALDQVDE LFTRAGNLQL LRVHGDCHAG
NVLWTDAGPH FVDLDDAVTG PAVQDLWMLL GGERHEMQTQ LGALLDGYET LREFDRRELG
LIEALRTLRI INHSAWIARR WRDPAFPIAF PSFESPSYWA QQTTVLHEQI GAMQGPALVA