| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0548 |
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| Symbol | |
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| ID | 6159812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 593202 |
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| End bp | 594149 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641663297 |
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| Product | peptidase A24A domain-containing protein |
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| Protein accession | YP_001789588 |
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| Protein GI | 171057239 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTCG TCGAACTGTC GTCGCTGACC TTCCTGCTGT CCGTCCCCGC ACTGGCCGTG
ATCGGCCTGT GCATCGGCAG CTTCCTCAAC GTGGTGGTGC ATCGTCTGCC GCTGATGCTC
GAGCGCCAGT GGCTGGGCGA CGTGCAGGCG ATGCTGCAGG ACAGCGCCGG CCTGCAGCGC
ACGCTCGGTG CGGGCATCGA CGCCGCGGCC GTGCAGCACC TGCACGACGG CGGCGAGCGC
CTGGGCTCGG CGCTGGCGTC GCTGCCGGCG CTGAGCCTGT CGCGGCCGCG CTCGCGCTGC
CCGGCCTGCG GCACCCAGCT GGGCTGGCAC CACAACCTGC CGATCCTGAG CTGGCTGGCG
CTGCGCGGGC GCTGCGCGGC CTGCCGGGCA CCGATCTCGC GGCGCTATCC GCTGGTCGAG
GCCGGCACCG CGCTGGCCTT CGGCCTGATC GGCTGGGTGT TCGGCCCGAC CGCCACCAGC
GTGGTCTATT GCGTGGCCGC GGCGCTGCTG ATCGCGATGG CGCTGATCGA TCTCGACACC
ACCTTGCTGC CCGACAGCCT GACCTACGCG CTGCTCGGCC TGGGCCTGTT TTCGGCCTGG
ATGGGCTGGA CGCCGCTGCG CCTCGAAGAC GCCGCGCTCG GCGTGCTGTT CGGCTACGGC
TCGTTGTGGG CGCTGACCAC GCTCTACGCG CTGCTGCGCG GCGTGCGTGG CATGGCCGAG
GGTGATTTCA AGCTGCTGGC GGCGCTGGGC GCGCTGCTGG GCGTGGCGCA ACTGCTGCCG
ATCGTGCTGC TGGCGTCGCT GGTGGGGGCG GCGGTCGGCA TCTTCCTGGT GCTCGCGCGT
GGCCACCAGC GCGAGGTGCC GATCCCGTTC GGCCCGTATC TGGCCGGTGG CGGCCTGGCT
GCGATGTTCT TCGGCCCGCA GCTGCTGCGC TGGTGGCTGC CGGTTTGA
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| Protein sequence | MDFVELSSLT FLLSVPALAV IGLCIGSFLN VVVHRLPLML ERQWLGDVQA MLQDSAGLQR
TLGAGIDAAA VQHLHDGGER LGSALASLPA LSLSRPRSRC PACGTQLGWH HNLPILSWLA
LRGRCAACRA PISRRYPLVE AGTALAFGLI GWVFGPTATS VVYCVAAALL IAMALIDLDT
TLLPDSLTYA LLGLGLFSAW MGWTPLRLED AALGVLFGYG SLWALTTLYA LLRGVRGMAE
GDFKLLAALG ALLGVAQLLP IVLLASLVGA AVGIFLVLAR GHQREVPIPF GPYLAGGGLA
AMFFGPQLLR WWLPV
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