Gene Lcho_0538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0538 
Symbol 
ID6161332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp586655 
End bp586942 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content64% 
IMG OID641663287 
Producthypothetical protein 
Protein accessionYP_001789578 
Protein GI171057229 
COG category[S] Function unknown 
COG ID[COG5569] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGC ACCACCGTCT CGGCCTGCTG CTGTGCGCCG CCGGCTTCAC GCTGACCGCC 
TGGGCCCAGG GCACCCCAGC AGAAGTCGTC AAGGTCGACA AGGGCCAGGG CAAGCTCACG
CTCAAGCACG GCCCGATCCA GAACCTCGAC ATGCCGGCCA TGAGCATGGT GTTCCGGGTC
CAGGATCAGC AATGGCTCGA CCAGCTCAAG GCCGGCGACA AGATCCGCTT CGACGCCGAA
AAGCTCAACG GCCAGTACAC CGTCACCCGA TTGAGCGTGC AGCGCTGA
 
Protein sequence
MKLHHRLGLL LCAAGFTLTA WAQGTPAEVV KVDKGQGKLT LKHGPIQNLD MPAMSMVFRV 
QDQQWLDQLK AGDKIRFDAE KLNGQYTVTR LSVQR