Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0538 |
Symbol | |
ID | 6161332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 586655 |
End bp | 586942 |
Gene Length | 288 bp |
Protein Length | 95 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641663287 |
Product | hypothetical protein |
Protein accession | YP_001789578 |
Protein GI | 171057229 |
COG category | [S] Function unknown |
COG ID | [COG5569] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTGC ACCACCGTCT CGGCCTGCTG CTGTGCGCCG CCGGCTTCAC GCTGACCGCC TGGGCCCAGG GCACCCCAGC AGAAGTCGTC AAGGTCGACA AGGGCCAGGG CAAGCTCACG CTCAAGCACG GCCCGATCCA GAACCTCGAC ATGCCGGCCA TGAGCATGGT GTTCCGGGTC CAGGATCAGC AATGGCTCGA CCAGCTCAAG GCCGGCGACA AGATCCGCTT CGACGCCGAA AAGCTCAACG GCCAGTACAC CGTCACCCGA TTGAGCGTGC AGCGCTGA
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Protein sequence | MKLHHRLGLL LCAAGFTLTA WAQGTPAEVV KVDKGQGKLT LKHGPIQNLD MPAMSMVFRV QDQQWLDQLK AGDKIRFDAE KLNGQYTVTR LSVQR
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