Gene Lcho_0533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0533 
Symbol 
ID6160750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp581142 
End bp581378 
Gene Length237 bp 
Protein Length78 aa 
Translation table11 
GC content63% 
IMG OID641663282 
ProductFis family transcriptional regulator 
Protein accessionYP_001789573 
Protein GI171057224 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG2901] Factor for inversion stimulation Fis, transcriptional activator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCGC CCCCGATTGA CGCCTCCATC CGCGACAACC TCGAGGTCTA TTTCCAGGAC 
CTCGAAGGCA CCGAGCCGCA TGCCCTCTAC GACATGGTGC TCAAGGCGGT CGAACGCCCG
CTGCTCGACG TCGTGATGCA GAAAGCCGAC GGCAACCAGA GCCGCGCCGC CGAATGGCTG
GGCATCAACC GCAACACCTT GCGTCGCAAG CTGCTCGAGC ACAAGCTGAT CGACTGA
 
Protein sequence
MSSPPIDASI RDNLEVYFQD LEGTEPHALY DMVLKAVERP LLDVVMQKAD GNQSRAAEWL 
GINRNTLRRK LLEHKLID