Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0533 |
Symbol | |
ID | 6160750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 581142 |
End bp | 581378 |
Gene Length | 237 bp |
Protein Length | 78 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641663282 |
Product | Fis family transcriptional regulator |
Protein accession | YP_001789573 |
Protein GI | 171057224 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG2901] Factor for inversion stimulation Fis, transcriptional activator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTCGC CCCCGATTGA CGCCTCCATC CGCGACAACC TCGAGGTCTA TTTCCAGGAC CTCGAAGGCA CCGAGCCGCA TGCCCTCTAC GACATGGTGC TCAAGGCGGT CGAACGCCCG CTGCTCGACG TCGTGATGCA GAAAGCCGAC GGCAACCAGA GCCGCGCCGC CGAATGGCTG GGCATCAACC GCAACACCTT GCGTCGCAAG CTGCTCGAGC ACAAGCTGAT CGACTGA
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Protein sequence | MSSPPIDASI RDNLEVYFQD LEGTEPHALY DMVLKAVERP LLDVVMQKAD GNQSRAAEWL GINRNTLRRK LLEHKLID
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