Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0525 |
Symbol | |
ID | 6161278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 571669 |
End bp | 572472 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641663274 |
Product | polypeptide-transport-associated domain-containing protein |
Protein accession | YP_001789565 |
Protein GI | 171057216 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1589] Cell division septal protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.981478 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCCGCG CACTCCAGAC CCCCTCCAGC CTGCCGTTCG ACGTGCGCCT GATGCACGCC GGTGCACAGC TGCTGCTGGT GCTGGCCCTG CTCGCGGTGC TGGCCAGCGC GCTGGCCTGG GTAGCGCGCT CGCCGGTCTT CAGCCTTCGG CAGATCCGCA TCGAGGGCGA CGTGACGCAC AGCAGCGCGG CCACCATCCG CAGCCACGCC GTGCCGCAGC TGGCGGGCAG CTACTTCAGC CTGAACCTGC GCGAGGCGCG CCAGGCCTTC GAGACCGTGC CCTGGGTGCG GCACGCGCAG GTGCGCCGGG TCTGGCCGCA TCAGCTGCTG GTCACGCTCG AAGAGCACCG GCCGGTGGCC TACTGGGAGC GCGCCGATGC CGATCCCCTG CTGGTCAACA GCCACGGCGA GGTGTTCGAG GTCAATCTCG GTGATGTCGA GGACGAGGCG CTGCCGGTGC TGCGCGGCCC GAACGGCAGT GCCGCGCAGG TGTGGGCGAT GTGGCAGCGC CTGGCCCCCG AATTCGAGCT GCTCGGCGCC CGCATGCTGC GCCTCGCGCT GTCGGACGGC GGCTCCTGGC AGGCCCGGCT GGACAAGGCG CAGGCCGTGA TCGAACTCGG CCGCGGCGAG CCCGAGGAGG TGCTGCAGCG CACCCGCCGC TTCACCCACA GCGTCACCGA GATCAGCGCC CGGTATGAAA ACCGCTTGAT CGAATATGCC GACCTGCGCC ACAGCGACAG CTATGCGCTG CGCCTGGTCG GCATGGGCAC GATCGAACCC ACACAGCTGC GCAAAGGACG TTGA
|
Protein sequence | MARALQTPSS LPFDVRLMHA GAQLLLVLAL LAVLASALAW VARSPVFSLR QIRIEGDVTH SSAATIRSHA VPQLAGSYFS LNLREARQAF ETVPWVRHAQ VRRVWPHQLL VTLEEHRPVA YWERADADPL LVNSHGEVFE VNLGDVEDEA LPVLRGPNGS AAQVWAMWQR LAPEFELLGA RMLRLALSDG GSWQARLDKA QAVIELGRGE PEEVLQRTRR FTHSVTEISA RYENRLIEYA DLRHSDSYAL RLVGMGTIEP TQLRKGR
|
| |