| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0521 |
|---|
| Symbol | |
|---|
| ID | 6162862 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | + |
|---|
| Start bp | 566872 |
|---|
| End bp | 568140 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641663270 |
|---|
| Product | cell division protein FtsW |
|---|
| Protein accession | YP_001789561 |
|---|
| Protein GI | 171057212 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0772] Bacterial cell division membrane protein |
|---|
| TIGRFAM ID | [TIGR02614] cell division protein FtsW |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.441545 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCG CCGCCAATGC CGTGACCGGC TGGCAGGCCC GCCTGCGCGC GCGCGTGGCG
GGCTGGCTGC CGGGCGGCGA AAGCGCCGTG CTGGAGCGCG ACTGGGTCGG CGCCACGGCA
GGCCAGCCGA CGCGCTGGGT CGGCTTCGAC GCGGCCTTGC TGTGGGTCGT CGTCGGACTG
CTCAGCCTCG GCCTGGTGAT GGTCTATTCG GCCTCGATCC AGCTGCCCGA CAACCCGCGT
TTTGCCAACT ACGAGCCGAC CCATTTCTTC AGCCGGCAGA TCCTGGCGAT CTCGATGGCC
GGCATCCTGG GCGGCGTCAC GCTGACGATC CCGATGCGCA CCTGGGAGCG GGTGGCGCCG
TGGCTGTTCG TCGCCGCGCT GATCCTGCTG GTGCTGGTGC TGGTGCCCTA CATCGGCAAG
GTGGTGAACA AGTCGCGGCG CTGGATCCCG CTGGGCATCA TCAACTTCCA GCCCAGCGAG
CTGGCCAAGC TGGCGATCGC GATGTACGCG GCCAACTACA TGGTCCGCAA GATGGACGTC
AAGGAGAGCT TCACCCGAGC GGTGCTGCCG ATGGCGATCG CGCTGCTGTT CATCGGCCTG
CTGCTGCTGG CCGAGCCGGA CATGGGCGCC TTCATCGTGA TCGCGATGAT CGCGATGGGC
ATCCTGTTCC TGGGCGGCGT CAACGGCCGC ATGTTCCTGA TCATCATCGC GGTGCTGGTG
GGCTCGTTCG TGCTGATGAT CTCGTTCAGC GAGGTCCGCC GCGAGCGCAT CCTGGCCTAT
CTCAACCCGT GGGACGAGCT GTACGCGCAG GGCAAGGGCT ACCAGCTGAC GCACTCGCTG
ATCGCCTTCG GCCGCGGCGA GATCTTCGGC CAGGGCCTGG GCTCGTCGGT CGAGAAGCTG
CATTACCTGC CCGAGGCGCA CACCGACTTC CTGCTCGCCG TGATCGGCGA GGAGCTCGGC
CTGGTCGGCG TGGTCGCGGT GATCCTGGCG TTCTTCTGGA TGGTGCGGCG CATCTTCATG
ATCGGCCGCC AGGCCATCGC GCTCGACCGC GTCTTCGCCG GCCTGACGGC GCAGGGCATC
GGCGTGTGGA TCGGCGGCCA GGCCTTCATC AACATGGGCG TGAACCTGGG CGTGCTGCCC
ACCAAGGGCC TGACCCTGCC GCTGATGAGC TACGGCGGCT CGGCCATCGT GCTGAGCGTG
ATCGCGCTGG CAGTGGTGCT GCGGGTCGAC ATCGAGAACC GGCAGCTGAT GCGGGGGGCG
AAGGCATGA
|
|---|
| Protein sequence | MSAAANAVTG WQARLRARVA GWLPGGESAV LERDWVGATA GQPTRWVGFD AALLWVVVGL
LSLGLVMVYS ASIQLPDNPR FANYEPTHFF SRQILAISMA GILGGVTLTI PMRTWERVAP
WLFVAALILL VLVLVPYIGK VVNKSRRWIP LGIINFQPSE LAKLAIAMYA ANYMVRKMDV
KESFTRAVLP MAIALLFIGL LLLAEPDMGA FIVIAMIAMG ILFLGGVNGR MFLIIIAVLV
GSFVLMISFS EVRRERILAY LNPWDELYAQ GKGYQLTHSL IAFGRGEIFG QGLGSSVEKL
HYLPEAHTDF LLAVIGEELG LVGVVAVILA FFWMVRRIFM IGRQAIALDR VFAGLTAQGI
GVWIGGQAFI NMGVNLGVLP TKGLTLPLMS YGGSAIVLSV IALAVVLRVD IENRQLMRGA
KA
|
|---|
| |