Gene Lcho_0519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0519 
SymbolmraY 
ID6162860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp563771 
End bp564952 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content65% 
IMG OID641663268 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_001789559 
Protein GI171057210 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.181822 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGTTA GCCTCGCCAA CTGGCTGCAA GGCCACTATC CCGACAGCTT CGGCTTCCTG 
CGCGTGGTCC AGTACCTGAC CTTCCGCGCC GTGATGTCGG CCATGACCGC GCTGCTGCTC
GGCCTGGTCT TCGGCCCCTG GGTGATCCGC CGCCTGACCG AGCTCAAGAT CGGTCAGCCG
GTGCGCGAGT ACGGCGTGCA GAGCCACCTG GTCAAGACCG GCACGCCGAC GATGGGCGGC
GTGCTGATTC TGCTGTCGAT CGCGGTGTCG ACGTTGCTGT GGTTCGACTG GAGCAACCGC
TTCGTCTGGG TCGTGATGCT GGTGACCTTC GGCTTCGGCG CGATCGGCTG GGTCGACGAC
TGGCGCAAGG TGGTGCAGAA GAATCCCGAA GGCATGGCCT CGGGCGAGAA GTACCTGTGG
CAGTCGCTGA TCGGGCTGGT CGCGGCCATC TACCTCGCCT TCAGCGTCTC GGAAACCTCC
AACCTGCGCG TGCTCGAGCT GTTCCTGCGC TGGGTGGGCT CGGGCTTCTC GAACGACCTG
CCGCCCAAGG CCGACCTGAT CGTGCCCTTC TTCAAGTCGG TGAGCTATCC GCTGGGCGTG
TTCGGCTTCA TCTTCCTGAC CTACTTCGTC ATCGTCGGCG CCAGCAACGC GGTCAACCTG
ACCGACGGCC TCGACGGCCT GGCAATCATG CCGGTGGTGC TGGTGGGCTC GGCGCTGGGG
TTGTTCGCCT ATGTCACCGG CAACTCGGTG TTCTCGAAGT ACCTGCTGCT GCCGCACATC
CCGGGGGCCG GCGAACTGCT GATCTTCTGC GCCGCGATGG CCGGCGCCGG GCTGGCCTTC
CTGTGGTTCA ACGCCTACCC GGCGCAGGTC TTCATGGGCG ACGTCGGCGC GCTGGCGCTG
GGCGGCGCGC TCGGCACCAT CGCGGTGATC GTGCGCCAGG AGATCGTGCT CGGCATCATG
GGCGGCATCT TCGTCGTCGA GGCGCTGTCG GTGATGGCGC AGGTGGCCTA CTTCAAGTAC
ACCAAGAAGC GCTACGGCCA GGGCCGGCGC ATCCTGCTGA TGGCGCCGCT GCACCACCAC
TACGAGAAGA AGGGCTGGGA AGAGACCCAG GTCGTCGTGC GGTTCTGGAT CATCACGATG
CTGCTGTGCC TCGTGGGTCT GTCCACCTTG AAACTCAGGT GA
 
Protein sequence
MLVSLANWLQ GHYPDSFGFL RVVQYLTFRA VMSAMTALLL GLVFGPWVIR RLTELKIGQP 
VREYGVQSHL VKTGTPTMGG VLILLSIAVS TLLWFDWSNR FVWVVMLVTF GFGAIGWVDD
WRKVVQKNPE GMASGEKYLW QSLIGLVAAI YLAFSVSETS NLRVLELFLR WVGSGFSNDL
PPKADLIVPF FKSVSYPLGV FGFIFLTYFV IVGASNAVNL TDGLDGLAIM PVVLVGSALG
LFAYVTGNSV FSKYLLLPHI PGAGELLIFC AAMAGAGLAF LWFNAYPAQV FMGDVGALAL
GGALGTIAVI VRQEIVLGIM GGIFVVEALS VMAQVAYFKY TKKRYGQGRR ILLMAPLHHH
YEKKGWEETQ VVVRFWIITM LLCLVGLSTL KLR