| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0517 |
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| Symbol | murE |
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| ID | 6162488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 560774 |
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| End bp | 562315 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641663266 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
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| Protein accession | YP_001789557 |
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| Protein GI | 171057208 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.377262 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTGC ATCAGCTGCC CGACGTCGAT GCCGCGCTGG CGTGGCTGCG GGCGCGGCTC
GGCGACGCCG CCGAGCTGCG CACCGACAGC CGCAGCGTGC GCGCCGGCGA GGCCTTCATC
GCCTGGCCGG GTCATGCCGC CGATGGCCGC GCCTACGTCG GCGCGGCGCT GGCGGCCGGC
GCCGCGGCCT GCCTGATCGA GGCCGACGGC GCCGCGGCCT TCGGTTTCGA TGACGAGCGC
ATCGCCGCGC TGCCGGGTCT GAAGGCCGCC ACCGGCGAGC TGGCGCACCG CTGGTACGGC
GAGCCCGGCC GGCGCCTGGC GCTGATCGCC ACCAGTGGCA CCAACGGCAA GACCTCGACC
GCCTGGTGGA CCGCGCAGGC GCTGAGCCTG GCCGGCCAGC GCTGCGGCGT GATCGGCACG
CTGGGCGTGG GCGAGCCGCC CAGCCGCGTC CATCCCGACG CTCAGGTGCA CGCCACCGGC
CTGACCACGC CCGATCCGCT GACGCTGCAC CGCAGCCTGC GCGATTTCGC CGACGCCGGT
TTCGCCGCCT GCGCGATCGA GGCCTCGTCG ATCGGCATCG TCGAACACCG GCTCGACGCG
GCGCCGATCC GGGTCGCGCT CTACACCAAC TTCACGCCCG ACCACCTCGA CTACCACGGC
GACATGGTGG CCTACTGGCT GGCCAAGCGC GCGCTGTTCG ACTGGCCGGG CCTGCAGGCT
GCCGCCATTA ACGTCGACGA CGCGCAGGGC GCCGTGCTGG CCGACGAACT GGCCGCGCGT
GGCGATCTCG ACCTCTGGAC CTACGCGCTG CATCGCGATG CGCGCCTGCG TGCGACCGGC
CTGCATTACG TCGACGGCGG CCTGGCCTTC ACGCTGCACG AGGGCGAAAC CGACGTGGCG
GTGCACACCC ACCTGATCGG CGCCTACAAC GCCTCCAACG TGCTGGCCGT GATCGGCGGC
CTGCGCGCGC TCGGCCTGCC GCTGGCGCAG GCGGCGGCGC TGGCGGCCGA ATTCACCTCG
GTGCCCGGGC GCATGCACAG AGTCCGGCCG GCAAGCCCGA CCGGCGCTGT GCCGCAGGTC
GTGGTCGCTC TACCGCAGGT GGTCGTCGAT TACGCCCACA CGCCCGATGC GCTCGACAAG
GCCCTGAGCG CCCTGCGGCC GGTCGCGCAT GCGCAAGGCG GCCGACTGGT GTGCGTGTTC
GGCTGCGGCG GCAACCGCGA TGCGACCAAG CGCCCTCAGA TGGGCGCCAT CGCCGCGCAG
CTGGCCGACG CGGTCTGCGT CACCAGCGAC AACCCGCGGC TCGAAGAACC GCAAGCCATC
GTCGACCAGA TCCTGGCCGG CTGTGCAGGC GCGGCGCACG TGCGCGCCGA GGTCGACCGC
ACACGCGCCA TCGAACAGGT GCTGGCGCAG GCAGCGCCCG AGGACGTGGT GCTGATCGCC
GGCAAGGGCC ACGAGGACTA CCAGGACATC GGCGGCGTCA AGCGGCCGTT TTCCGACATC
GACGTGGCCA CGGCCGCGTT GCAACGCCGG GTGACGGCAT GA
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| Protein sequence | MALHQLPDVD AALAWLRARL GDAAELRTDS RSVRAGEAFI AWPGHAADGR AYVGAALAAG
AAACLIEADG AAAFGFDDER IAALPGLKAA TGELAHRWYG EPGRRLALIA TSGTNGKTST
AWWTAQALSL AGQRCGVIGT LGVGEPPSRV HPDAQVHATG LTTPDPLTLH RSLRDFADAG
FAACAIEASS IGIVEHRLDA APIRVALYTN FTPDHLDYHG DMVAYWLAKR ALFDWPGLQA
AAINVDDAQG AVLADELAAR GDLDLWTYAL HRDARLRATG LHYVDGGLAF TLHEGETDVA
VHTHLIGAYN ASNVLAVIGG LRALGLPLAQ AAALAAEFTS VPGRMHRVRP ASPTGAVPQV
VVALPQVVVD YAHTPDALDK ALSALRPVAH AQGGRLVCVF GCGGNRDATK RPQMGAIAAQ
LADAVCVTSD NPRLEEPQAI VDQILAGCAG AAHVRAEVDR TRAIEQVLAQ AAPEDVVLIA
GKGHEDYQDI GGVKRPFSDI DVATAALQRR VTA
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