| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0505 |
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| Symbol | gatC |
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| ID | 6162132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 547854 |
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| End bp | 548153 |
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| Gene Length | 300 bp |
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| Protein Length | 99 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641663254 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit C |
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| Protein accession | YP_001789545 |
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| Protein GI | 171057196 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0721] Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit |
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| TIGRFAM ID | [TIGR00135] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0158899 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACTCA CCCCCGCGGA TGTGAGTCGC ATCGCCAACC TGGCGCGACT CGAACTGAGC
ACGGCCGAGC AGAGCGATCT GCTGGTCCAG CTGAACGGCT TTTTCGGCAT CGTCGAGCGC
ATGCGTGCGG TCGACACCAC CGGCGTGGCG CCGCTCTACA CGCCCTTGTC GGCGGTGCAG
GACGTCAGCC TGCGCCTGCG TGACGACGCC GTCACCGAGA CCGACCAGCG CGAGGCCAAC
CAGAAAAGCG CCCCGGCCGT CGAAGGCGGC CTGTTCCTGG TTCCGCGGGT GATCGAGTGA
|
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| Protein sequence | MALTPADVSR IANLARLELS TAEQSDLLVQ LNGFFGIVER MRAVDTTGVA PLYTPLSAVQ
DVSLRLRDDA VTETDQREAN QKSAPAVEGG LFLVPRVIE
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