| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0500 |
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| Symbol | |
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| ID | 6161822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 541651 |
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| End bp | 542805 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641663249 |
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| Product | rod shape-determining protein RodA |
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| Protein accession | YP_001789540 |
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| Protein GI | 171057191 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0772] Bacterial cell division membrane protein |
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| TIGRFAM ID | [TIGR02210] rod shape-determining protein RodA |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0107532 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCACA GCCTGAATCA GCCCACCTTC CGGCAGCGCC TGCGGCCGTG GTTCACCGGT
TTCGACATCG GCCTGGTGAT CGCCATCGCG CTGCTGTGCG GCTGCGGCCT GCTGGCGATG
TATTCGGCCG GCTTCGACCA CGGCACCCGT TTCGTCGACC ATGCCCGCAA CATGGCGCTG
GCCGGGCTGA TCCTGTTCGT CGTCGCCCAG GTGCCGCCGC AGCGGCTGAT GGCGCTGGCC
GTGCCGATCT ACACCGTCGG CGTCGTGCTG CTGGTGGCGA CGGCCCTGTT CGGCCTGACC
AAGAAGGGCG CGACCCGCTG GCTCAACGTC GGCGTGGTGA TCCAGCCCAG CGAGATCCTC
AAGATCGCCA CCCCGCTGAT GCTGGCCTGG TGGTTCCAGC GCCGCGAAGG CCGGGCGCAG
CCGCGCCACT TCGTCGCCGC CGGCCTGCTG CTGCTGGTGC CCACGGCGCT GATCGCCAAG
CAGCCGGACC TGGGCACCGC GATCCTGGTG TTCTCGTCGG GCTTCTTCGT GATCTTCTTC
GCCGGCCTGT CGTGGCGGCT GATCCTGCCG GTGGCGCTGG TGGGCGGGGT GTCCGTCGTC
GCGCTGGTGG CGGCCGGGCC GACCCTGTGC GAACCCGGCG TCGACTGGGT GGTGCTGCAC
GACTACCAGA AGAACCGTGT CTGCACCCTG CTCGACCCGA CCAAGGACCC GCTCGGCAAG
GGCTTCCACA TCATCCAGGG CATGATCGCG ATCGGCTCGG GCGGGGTCAC CGGCAAGGGC
TTCATGAAGG GCACCCAGAC CCACCTGGAG TTCATCCCCG AGCGCACCAC CGACTTCATC
TTCGCCGCCT TCTCCGAAGA ATTCGGCCTG ATCGGCTGCC TGCTGCTGCT GATGTGCTTC
GCCTTCCTGA TCCTGCGCGG GCTGGCGATC TCGTTTGCGG CGCCGACCGC GTTCGCGCGC
CTGCTCGGCG GCGCCATCAC GCTGAGCTTC TTCACCTACG CGATGGTCAA CATGGGCATG
GTCAGCGGCA TCTTGCCGGT GGTCGGCGTG CCGCTGCCCT TCATCAGCTA CGGCGGCACC
GCCATGGTCA CGCTCGGGCT GTCGCTGGGC ATGCTGATGT CGATCGCCCG CGCCCGCGGC
CTGATGCAGA GCTGA
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| Protein sequence | MSHSLNQPTF RQRLRPWFTG FDIGLVIAIA LLCGCGLLAM YSAGFDHGTR FVDHARNMAL
AGLILFVVAQ VPPQRLMALA VPIYTVGVVL LVATALFGLT KKGATRWLNV GVVIQPSEIL
KIATPLMLAW WFQRREGRAQ PRHFVAAGLL LLVPTALIAK QPDLGTAILV FSSGFFVIFF
AGLSWRLILP VALVGGVSVV ALVAAGPTLC EPGVDWVVLH DYQKNRVCTL LDPTKDPLGK
GFHIIQGMIA IGSGGVTGKG FMKGTQTHLE FIPERTTDFI FAAFSEEFGL IGCLLLLMCF
AFLILRGLAI SFAAPTAFAR LLGGAITLSF FTYAMVNMGM VSGILPVVGV PLPFISYGGT
AMVTLGLSLG MLMSIARARG LMQS
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