Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0499 |
Symbol | |
ID | 6161821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 540079 |
End bp | 541635 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641663248 |
Product | histidine kinase |
Protein accession | YP_001789539 |
Protein GI | 171057190 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.00445235 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGCCGGCGC TGCCGGCGAT CGTGCGCCGC CGCGAGCAGC GTTCGCTGTT CGGCGAGATC CTCGACTGGA TGCTCGCGCC GCTGCTGGTG ATCTGGCCGA TGAGCCTGGC GCTGACCTGG CTGGCCGCGC AGGGCATCGC CAACAAGCCG TACGACCGCG CGCTGCTCGA ATCGGTGCGC ACGCTGGCGC AGCGCATCGA GCCGGGCGAG CGCGGCATCC GTTTCGATCT GCCCAAGGAG ACCGCCCGGC TGTTCCGGGC CGACGAGCTC GACAACGTCT ACTACCAGGT GCTGGGCACA CGTGGCGAGT TCGTCAGCGG CGACCGCGAC CTGCCGGTGC CGCCCGACGG TGACGGCGGC GTGCTCGGCG AGCCGCGCAT CCGCGACGAC GAGGTGCAGG ACGACAGCGT GCGGGTGGTC TACGTCTGGG TGGCGGTGCC GGGGTCGAGC CGGCCGGCGC TGGTGCAGGT CGGCGAGACG CTGACCAAGC GCTCGCGCCT GGCCACCGAG ATCATCAAGG GCGTGATCCT GCCGCAGTTC GTGATCCTGC CGGTGGCGGT GCTGCTGGTG TGGTTTGCGC TCGCGCGCGG GCTGGCGCCG CTCAACGCGC TGCAGCGGCG CATCCGCGAG CGCCACAGCG ACGACCTGTC GCCGATCGAC GTGCACGACG TGCCCGAGGA GGTCTCGCCG CTGGTGCAGG CGTTCAACGA CCTGCTCGAA CGTCAGCAGG GCTCGATGAG CACGCAGAAG CGCTTCCTGG CCGATGCCGC GCACCAGCTC AAGACGCCGC TGGCGGGCCT GCGCATGCAG GCCGAACTGG CCGCCCGGGC GGTGGCCAGC GGCAACGGCG ACGCGCGTGC GCTGCAGGCT TCGCTCGAAC ACATGGCCAA CGCCTCGCAG CGTGCCGCAC ACATGGTCAA CCAGCTGCTG TCGATGGCCC GTGCCGATGC CCAGGCCGGC ATCGCCGCAC GCGCGGTGCT CGACCTGCGC GTGCTGGCGA TCGACGTCGT GCGCGACTTC GTGCCCAAGG CGCTCGACAA GGGCATCGAC CTCGGCTACG AAGGCCCCGA GCCGGTACCG GACGACGCCT CCGAGGCCGA TACCGCGGCG GTCGACTGCC GCGTCCTCGG CCATCCGCTG CTGCTGCGCG AGCTGATCGC CAACCTGGTC GACAACGCCC TGCAGTACAC GCCCACGCGT GGCACCGTGA CCGTGCGGCT GCTGGTCGAT CCGTTCGGCC AGGTGGTGGT GCTGCAGGTC GAGGACTCGG GGCCGGGCAT TCCGCAGGCC GAAAAGGATC TGGTGTTCCA GCCCTTCTAC CGCGCGCTGG GCACGCCGGT GGACGGCTCG GGCCTGGGCC TGGCGATCGT GGCCGAGATC GCGGCCCAGC ACGGCACCAC GATCGCGCTC GACGATGCCC GCAGCGGTGC GCAGATCCCG CCGGGCGAGG GGCCGGGCGC GCGCTTCACG TTGCGCCTGC CGCGTGCCCA GCCCAGCCCG CCGAGCGACG ATGCCGACCT GGCGCAGACG CAGACGCAGA CGCAGACGCA GGCCTGA
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Protein sequence | MPALPAIVRR REQRSLFGEI LDWMLAPLLV IWPMSLALTW LAAQGIANKP YDRALLESVR TLAQRIEPGE RGIRFDLPKE TARLFRADEL DNVYYQVLGT RGEFVSGDRD LPVPPDGDGG VLGEPRIRDD EVQDDSVRVV YVWVAVPGSS RPALVQVGET LTKRSRLATE IIKGVILPQF VILPVAVLLV WFALARGLAP LNALQRRIRE RHSDDLSPID VHDVPEEVSP LVQAFNDLLE RQQGSMSTQK RFLADAAHQL KTPLAGLRMQ AELAARAVAS GNGDARALQA SLEHMANASQ RAAHMVNQLL SMARADAQAG IAARAVLDLR VLAIDVVRDF VPKALDKGID LGYEGPEPVP DDASEADTAA VDCRVLGHPL LLRELIANLV DNALQYTPTR GTVTVRLLVD PFGQVVVLQV EDSGPGIPQA EKDLVFQPFY RALGTPVDGS GLGLAIVAEI AAQHGTTIAL DDARSGAQIP PGEGPGARFT LRLPRAQPSP PSDDADLAQT QTQTQTQA
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