Gene Lcho_0496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0496 
Symbol 
ID6161818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp537626 
End bp538099 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content71% 
IMG OID641663245 
Productregulatory protein RecX 
Protein accessionYP_001789536 
Protein GI171057187 
COG category[R] General function prediction only 
COG ID[COG2137] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0012362 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCAGCA ACCGGCCGCA ACTCTCGCTC AAGGGCCGGG CGCTCAAGTA CTTGGCGGCG 
CGCGAACACT CGCGCGCCGA ACTGGCGCGC AAGCTGGCCC CGCATGCCGG CGATCCGGCT 
GAGATCGAGG CCGTGCTCGA CGACCTGCAG GCTCGCGGCT TCCTGAGCGA GGCCCGCTAC 
GTGGCGTCGG TCGTGCACCG GCGCGCCGAA CGATTCGGCG TCGCGCGCAT CCGCCAGGAG 
CTGCTCAGCA AGGGCACGCC GGCCGACCAG ATGACCGACG CACTCGATGC GCTGCGCACG 
ACCGAGCTGG AGCGGGCCCG CGAACTGTGG CGCCGCCGCT TCGGCCAGCC CCCGGCGGAT 
GCGCGCGAAG CGGCTCGGCA GAATCGCTTC CTGATGTCCC GCGGCTTCTC CAGCGACGTC 
GTGCGCCAGG TGCTGCGCCT GGCCGATCAC GAACACGACC ACGACAACAC GTAG
 
Protein sequence
MASNRPQLSL KGRALKYLAA REHSRAELAR KLAPHAGDPA EIEAVLDDLQ ARGFLSEARY 
VASVVHRRAE RFGVARIRQE LLSKGTPADQ MTDALDALRT TELERARELW RRRFGQPPAD 
AREAARQNRF LMSRGFSSDV VRQVLRLADH EHDHDNT