| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0466 |
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| Symbol | |
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| ID | 6160925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 506029 |
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| End bp | 507315 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641663215 |
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| Product | sodium:galactoside symporter family protein |
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| Protein accession | YP_001789506 |
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| Protein GI | 171057157 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGCGG CGCAGCAGGC GGTGCCGTGG CGCGCCGGCC TCGGCTACGG CGCGCTCGGC
CTGCCGCTGG CCTTCGTGGC GCTGCCGCTG TATGTGCTGC TGCCGCTGCA CTATGCCGAT
CGCTACGGCG TGTCGCTCGC TGCGCTGGGC CTGCTGCTGC TGGCGGCGCG GGCCTTCGAT
GCGGGGGTCG ATCCGCTGCT CGGGCGCTGG GCCGATCGGC TGCTGGCGGC CGGGCCGCGC
GCCGCCTGGG CGGTGATCGG CGGCGCGGCC GGGGTGCTGG CGCTGGGTTT CGTCGCGCTG
TTCTTTCCGC TGGTGCGGGG CGAGTCGGCG CTGCTGGTGT GGTGCGGCGT CGGGCTGCTG
GTGACCTATC TCGCCTACAG CACCGCCAGC ATCGTGCACC AGGCCTGGGG CGCGCGGCTG
GGCGGCGGCG ACGCGGTGCA GGCGCGCTGG GTGTCGTGGC GTGAAGGCGC GGCGCTGGCC
GGCGTGATAG TGGCGAGCGT GCTGCCGTCG CTCGCCGGGC TGGGCTGGAC GGCCGCCACG
CTGGCGGTGC TGCTGCTGAT CGCGTGGGCG ATGCTGGGCC GCGTGCAGCG CGTCAGCGTC
CCACGGCACG AGACGGCGCC GACTCCGCAC GCGCCGATCT GGGCGCCATG GTCGCAGCCC
GCCTTTCGCC GCCTGATCGG CGTCTACCTG CTCAACGGCG TCGCCAGCGC GGTGCCGGCC
ACGCTGGTGC TGTTCTTCGT GCGCGACCGG CTGCAGGCGC CGGCCTGGGA GGGCGCTTTC
CTGGCCGCCT ACTTCGCCGC CGGCGCCTTG TCGCTGCCGG TCTGGGTGCG CGTGATCTCG
GCCTGGGGGC TGATCCGCAG CTGGGCCGCC GGCATGGTGC TGGCGGTGCT GACGTTTGCC
GGCGCCTGGA GCCTGGGCGC GGGCGATGTC GCCGGCTTCA TGCTGGTCTG CCTGGCCAGC
GGGCTGGCGC TCGGTGCAGA CCTGGCCGTG CCCGGCGCGC TGCTGGCCGG CGTGGTGCGG
CGCAGCGGCT CGGGCGGCAT CGCCGAGGGC GCGTATTTCG GCTGGTGGAA CGGCGCGACC
AAGTTGAACC TGGCGCTGTC GGCCGGCCTG GTCCTGCCCG CGCTCGAATG GGCCGGTTAT
CGCCCCGGCA GCACCGACGG CGAGGGCCTG CTGGCCCTGA GCCTGGCCTA CGCCGTGCTG
CCCTGTGTGC TCAAGCTGCT CGCCGGCCTG GTGTTGTGGC GATCTGCGCC GGCCATTTCC
GCCGGCTCGT CAACGAAGGA AACCTGA
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| Protein sequence | MNAAQQAVPW RAGLGYGALG LPLAFVALPL YVLLPLHYAD RYGVSLAALG LLLLAARAFD
AGVDPLLGRW ADRLLAAGPR AAWAVIGGAA GVLALGFVAL FFPLVRGESA LLVWCGVGLL
VTYLAYSTAS IVHQAWGARL GGGDAVQARW VSWREGAALA GVIVASVLPS LAGLGWTAAT
LAVLLLIAWA MLGRVQRVSV PRHETAPTPH APIWAPWSQP AFRRLIGVYL LNGVASAVPA
TLVLFFVRDR LQAPAWEGAF LAAYFAAGAL SLPVWVRVIS AWGLIRSWAA GMVLAVLTFA
GAWSLGAGDV AGFMLVCLAS GLALGADLAV PGALLAGVVR RSGSGGIAEG AYFGWWNGAT
KLNLALSAGL VLPALEWAGY RPGSTDGEGL LALSLAYAVL PCVLKLLAGL VLWRSAPAIS
AGSSTKET
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