| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0460 |
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| Symbol | |
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| ID | 6160559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 499880 |
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| End bp | 500839 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641663209 |
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| Product | MerR family transcriptional regulator |
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| Protein accession | YP_001789500 |
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| Protein GI | 171057151 |
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| COG category | [K] Transcription |
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| COG ID | [COG0789] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCG AATCACCCAC CGAAGCGCCG GCCTCGCCGC TGTCGCTGAC GATCGCCGCG
GTCGAGCGCG ACACCCGCAT CGGCAAGGAC ACCCTGCGGG TGTGGGAGCG CCGCTACGGC
TTCCCGCAGC CCAGCCGCGA CGCCAACGGC GAGCGCCTGT ATCCGCCCGA TCAGGTCGAG
CGGCTGCGCC ACGTCAAGCG CATGCTCGAC GCCGGCCATC GCCCGGGCCG CATCGTCAAC
CTGAGCCTCG ACGAGCTGCA GCGGCTGGGC GATGGCAGCC CCGTCGGCGG CAGCCCGGCC
GCCCGCGCCA GCACCGACGC GCACGACGAC ACCGAGGTCC AGCGCCTGTT GCGCCTGCTG
CGCGCGCACG ACCTCGGCGC ACTGCGTCGG GCCCTGAGCC AGGCGCTTCT GCGGGTCGGG
CTGGAGCGGT TCGTCATCGA TCTGGCGATG CCGCTGGTGG CCGAGGTCGG CCAGGCCTGG
GCGCGCGGGC AGCTGGAGGT GTTCGAGGAG CACCTGTGCA GCGAAACCCT CGAGACCGTG
CTGCGCACCG CCATGTCGGC GTCACCCGAA GCCAGCGCGG CGTCGCGGCC GCGGGTGGTG
CTGACGACGT TTCCGTTCGA GGCCCACGGC CTGGGCCTGC TGATGGCCGA CGCGCTGTTC
CTGGTGCACG GCTGCACCAC CATGAACCTG GGCCGGCAGA CGCCGCTGCA TGACCTGATG
CTGGCCAGCC AGGCCCACGC GACCGACATC GTCGCACTCA GCTTCAGCGC CGCCAGCAAC
CCGAACCAGG CTGCCGACAG CCTGGCGGAA CTGCGCTCGC GGCTGCCCGC AGAAGTCGAG
ATCTGGGCCG GCAGCCCGCT GGCGGCGCTG CACCGGCGGG CGGTCGACGG CGTGCTGCTG
ATCTCGAGCC TGGACGCGAT CGGCCCCGAG ATCGAACGCT GGAAGGCCGC CCGGCGCTGA
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| Protein sequence | MSIESPTEAP ASPLSLTIAA VERDTRIGKD TLRVWERRYG FPQPSRDANG ERLYPPDQVE
RLRHVKRMLD AGHRPGRIVN LSLDELQRLG DGSPVGGSPA ARASTDAHDD TEVQRLLRLL
RAHDLGALRR ALSQALLRVG LERFVIDLAM PLVAEVGQAW ARGQLEVFEE HLCSETLETV
LRTAMSASPE ASAASRPRVV LTTFPFEAHG LGLLMADALF LVHGCTTMNL GRQTPLHDLM
LASQAHATDI VALSFSAASN PNQAADSLAE LRSRLPAEVE IWAGSPLAAL HRRAVDGVLL
ISSLDAIGPE IERWKAARR
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