Gene Lcho_0458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0458 
Symbol 
ID6163912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp498553 
End bp499125 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content66% 
IMG OID641663207 
ProductYceI family protein 
Protein accessionYP_001789498 
Protein GI171057149 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCT CACTGACCTT CACCGCCGCC GTGGCCGCGT TCACCTTCCT GGCCAGCGGC 
GCCGCCTGCG CGCAGCAGAA AGTCGATGCC GCCAAGAGCG AGATCGGCTT CGTCAGCAAG 
CAGATGGGCG TGCCGGTCGA AGGCAAGTTC CGCAAGTTCG ACGCCCAGCT GGCGTTCGAT 
CCGAAGAAGC CCGAAGGCGG CAAGGTGAGC TTCAGCATCG ACCTCGGCAG CGCCACCCTG 
GGCGTGCCCG AATCCGATGC CGAGCTGCCC AAGGCCACCT GGTTCAACGT GCCGAAGTTC 
CCGCAGGCGA CCTTTCAGTC GAGCGCGATC AAGGCCTTGG GCGGCGGCAA ATATGAAGTG 
GCCGGCAAGC TGAGCATCAA GGGCGCCGTC AAGGACGTGA CCGTGCCGGT GGCGCTGGCC 
CAGGCCGGCG GCGCGACCAC CGCGACCGGC AGCTTCGCGA TCAAGCGCCT CGACTTCAAG 
ATCGGCGACG GCGACTGGGC CGACACCTCG ATGGTCGCCA ACGACGTCCA GGTGAAGTTC 
AAGCTGCAGA TCAGCGGCAT GGCCGCACTC TGA
 
Protein sequence
MNTSLTFTAA VAAFTFLASG AACAQQKVDA AKSEIGFVSK QMGVPVEGKF RKFDAQLAFD 
PKKPEGGKVS FSIDLGSATL GVPESDAELP KATWFNVPKF PQATFQSSAI KALGGGKYEV 
AGKLSIKGAV KDVTVPVALA QAGGATTATG SFAIKRLDFK IGDGDWADTS MVANDVQVKF 
KLQISGMAAL