| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0441 |
|---|
| Symbol | |
|---|
| ID | 6160773 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | + |
|---|
| Start bp | 482023 |
|---|
| End bp | 483222 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641663190 |
|---|
| Product | 4-hydroxybenzoate 3-monooxygenase |
|---|
| Protein accession | YP_001789481 |
|---|
| Protein GI | 171057132 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR02360] 4-hydroxybenzoate 3-monooxygenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCC AACGCACCCA GGTCGCCATC ATCGGCGCCG GCCCCTCGGG CCTTCTGCTC
GGCCAGCTGC TGCACAAGGC CGGCATCGCC AACATCGTGA TCGAGCAGCG CAGCGGCGAC
TACGTGCTCG GCCGCATCCG CGCCGGCGTG CTGGAGCAGG TCTGCGTCGA CCTGCTCGAC
GAGGCCGGTG TCGGCGCGCG CATGCACCGC GAGGGCCTGG TGCACCACGG CATCGAGCTG
GCCTTTGCCG GTCAGCGCCA CCGCATCGAC CTGAGTGGCC CGACCGGCGG CAAGGCGGTG
ATGGTCTACG GCCAGACCGA GGTCACGCGC GACCTGATGG ACGAACGCAC CGCCAACGGC
GCGCCGATCG TCTACGAGGC CGAACACGTC GAGGTGCACG ACTTCGACGG CAGCAACCCG
CGTGTCACCT ACCTGAAGGA CGGCGTGCGC CACGAGGTGC TGTGCGACTT CATCGCCGGC
TGCGACGGCT TCCACGGCGT CTGCCGCGCC AGCGTGCCGG CCGGGGCGAT CCGGAACTTC
GAGCGCGTCT ACCCGTTCGG CTGGCTCGGC ATCCTGGCCG ACGTGGCGCC GGCGGCCGAC
GAGCTGATCT ACTCGAACCA CGAGCGCGGC TTCGCGCTGT GCAGCATGCG CAGCAAGACA
CGGGTGCGCC ACTACGTGCA GTGCTCGCTG CAGGACAAGA TCGAGGACTG GAGCGACGCG
CGCTTCTGGG ACGAGCTCAA GAGCCGCCTC GACCCCGAGG CCGCCGCCAC GATCCCGACC
GGCCCGTCGA TCGAGAAGAG CATCGCGCCG CTGCGCAGCT TCGTGGCCGA GCCGATGCGT
TTCGGCCGCA TGTTCCTGGC CGGCGATGCC GCCCACATCG TGCCGCCCAC CGGCGCCAAG
GGCCTGAACC TGGCGGCGGC CGACGTGCGG TATCTCAGCC GCGCCTTCAT CGAGTTCTAC
GCCGACAAGA CGGCAGCCGG CATCGACGAC TACTCGCGCA AGGCGCTGCG CCGGATCTGG
AAGGCCGAGC GCTTCAGCTG GACCATGACC AGCCTGCTGC ACAAGTTCCC GGCCGGCGCG
GGCGACACCG GCGACGTCGG CTTCAAGCTG CAGATGGCCG AGCTCGACTA CCTCGTCAAC
TCGCCGGCCG CGATGGCCTC GCTGGCGGAA AATTACGTCG GTTTGCCATT CGAGGAGTGA
|
|---|
| Protein sequence | MSTQRTQVAI IGAGPSGLLL GQLLHKAGIA NIVIEQRSGD YVLGRIRAGV LEQVCVDLLD
EAGVGARMHR EGLVHHGIEL AFAGQRHRID LSGPTGGKAV MVYGQTEVTR DLMDERTANG
APIVYEAEHV EVHDFDGSNP RVTYLKDGVR HEVLCDFIAG CDGFHGVCRA SVPAGAIRNF
ERVYPFGWLG ILADVAPAAD ELIYSNHERG FALCSMRSKT RVRHYVQCSL QDKIEDWSDA
RFWDELKSRL DPEAAATIPT GPSIEKSIAP LRSFVAEPMR FGRMFLAGDA AHIVPPTGAK
GLNLAAADVR YLSRAFIEFY ADKTAAGIDD YSRKALRRIW KAERFSWTMT SLLHKFPAGA
GDTGDVGFKL QMAELDYLVN SPAAMASLAE NYVGLPFEE
|
|---|
| |