| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0437 |
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| Symbol | |
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| ID | 6164113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 477684 |
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| End bp | 478862 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641663186 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001789477 |
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| Protein GI | 171057128 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCG CCCCGTCCTC TCCCCGCCGC CTGCCGCTCG AAGGCGTGCG CGTCATCGAG
TTCACCCACA TGGTGATGGG CCCGACCTGC GGCATGGTCC TGGCCGACCT GGGCGCCGAG
GTCATCAAGA TCGAGCCGCC CGGCGGCGAC AAGACGCGCA GCCTGCCGGG CCTGGGCATC
GGCTTCTTCC GCAGCTTCAA CCGCAACAAG AAGAGCGTGG TGCTCGACAT CCAGACCCCC
GAGGGCCTGG CCACCGCGAA GGAGCTGATC GCGCAGAGCG ACGTGATGCT GGAGAACTTC
CGCCCCGGCC TGATGGCCAG GCTGGGGCTG GACCACGCCA CGCTGTCGGC GCAATGCCCG
CGGCTGATCT ACGTCTCGCA CAAGGGTTTC CTGCCCGGCC CCTACGAACA CCGCACCGCG
CTCGACGAGG TGGTGCAGAT GATGGGCGGC CTGAGCTACA TGACCGGCCC GGAAGGCCGG
CCGCTGCGCG CGGGCACCAG CGTCAACGAC ATCATGGGCG GCATGTTCGG CGCCATCGGC
GTGCTGGCCG CGCTGCGCGA GCGTGACCAC CCGACCCACG GCACCGGCCG CGGCCAGGAG
ATCCAGAGCG CGCTGTTCGA GAACTGCGCC TTCCTGTCGG CGCAGCACGT GCAGCAGTTC
CTGATGACCG GCGAGCCCGC CCCGCCGATG CCCAGCCGCG TGTCGGCCTG GAGCGTCTAC
GACGTCTTCA CGCTGGCCGA GGGCGAGCAG CTGTTCGTCG CCGCGACCAG CGACAAGCAG
TTCCAGACCC TGTGCCAGGT GCTCGATCGC CCCGACCTCG CCGCCGACCC GGCGCTGGCC
AGCAACGCCC AGCGCGTGGC CGTGCGCCCT GAGCTGCTCA AGCGCCTGGG CGAGACGATG
GCGCTGCAGC GCAAGGCCGC GCTCTCGGCC CGGCTCGAAG CCGCCGGCCT GCCGTATGCG
CCGATCACCC GGCCCGACGA GCTGGTCAAC GATCCGCACC TGCTCGCCAG CGGCGGCCTG
GCGCCGATGA CCACCGACGA CGGCGACACC ACCCAGGTCG TGCTGCTGCC GCTGCTGATG
GACGGCCACC GCCCCGGCGT ACGCAGCGCG CTGCCGCGGG TGGGCGAACA CACCGACGAG
GTGCTGGCCC GCCTACACGC CAGCCGCACG GCGGCATGA
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| Protein sequence | MNTAPSSPRR LPLEGVRVIE FTHMVMGPTC GMVLADLGAE VIKIEPPGGD KTRSLPGLGI
GFFRSFNRNK KSVVLDIQTP EGLATAKELI AQSDVMLENF RPGLMARLGL DHATLSAQCP
RLIYVSHKGF LPGPYEHRTA LDEVVQMMGG LSYMTGPEGR PLRAGTSVND IMGGMFGAIG
VLAALRERDH PTHGTGRGQE IQSALFENCA FLSAQHVQQF LMTGEPAPPM PSRVSAWSVY
DVFTLAEGEQ LFVAATSDKQ FQTLCQVLDR PDLAADPALA SNAQRVAVRP ELLKRLGETM
ALQRKAALSA RLEAAGLPYA PITRPDELVN DPHLLASGGL APMTTDDGDT TQVVLLPLLM
DGHRPGVRSA LPRVGEHTDE VLARLHASRT AA
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