| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0435 |
|---|
| Symbol | |
|---|
| ID | 6164111 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 476086 |
|---|
| End bp | 476610 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641663184 |
|---|
| Product | hexapaptide repeat-containing transferase |
|---|
| Protein accession | YP_001789475 |
|---|
| Protein GI | 171057126 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTCT ACCGTCTCAG CGGCCAGGCG CCGCAGGTGC CGGCCTCGGC TTACGTGGCC
GCCGAAGCCA CGCTGATCGG CCGGGTCGTT CTCGGCGAAC AGGCCAGCGT GTGGTCCGGC
GCGGTGCTGC GTGGCGACAA CGAGCCGATC CGCATCGGCG CGGCCAGCAA CATCCAGGAA
GGCGCCGTGC TGCACGCCGA CCCGGGCTTT GCGCTCGACA TCGGCGCCAA CGTGACGGTC
GGCCACCAGG CCATGCTGCA CGGCTGCACG ATCGGCGAGG GCTCGCTGAT CGGCATCCAG
GCCGTCGTGC TCAACGGTGC GGTGATCGGC CCGCACAGCC TCGTCGGCGC CGGTGCCATC
GTGACCGAGC GCAAGCGCTT TCCGGCCCGC TCGCTGATCA TCGGCGCACC CGCCAAGGTG
ATGCGGGAGC TGACCGACGA AGAGGTCGCG AACCTGATCG AGAGCGCCGC CAGCTACGCC
CGGCGCGCCA AGCTGTTCCA GCACGAACTC GAGCGCATCG GCTGA
|
|---|
| Protein sequence | MSLYRLSGQA PQVPASAYVA AEATLIGRVV LGEQASVWSG AVLRGDNEPI RIGAASNIQE
GAVLHADPGF ALDIGANVTV GHQAMLHGCT IGEGSLIGIQ AVVLNGAVIG PHSLVGAGAI
VTERKRFPAR SLIIGAPAKV MRELTDEEVA NLIESAASYA RRAKLFQHEL ERIG
|
|---|
| |