| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0427 |
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| Symbol | |
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| ID | 6163838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 468669 |
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| End bp | 469811 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641663176 |
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| Product | NAD(P)(+) transhydrogenase (AB-specific) |
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| Protein accession | YP_001789467 |
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| Protein GI | 171057118 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3288] NAD/NADP transhydrogenase alpha subunit |
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| TIGRFAM ID | [TIGR00561] NAD(P) transhydrogenase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGGTTG GAGTGCCGCT GGAATTGGCT GCCGGGGAAA CCCGTGTGGC CGTGACGCCC
GAGACGGCGA AAAAACTCAA GGCGCAGGGT CACACCGTGC GCATTCAGAG CGGCGCGGGC
GTGGCCGCCA GCGCCCCCGA CGAGGCCTAT GTGGCGGTCG GCGCCGAGAT CACCGATGCC
GCCGGCGTGC TCGCCTGCGA TCTGGTGCTC AAGGTGCGCG CGCCGTCCGA GTCCGAACTG
GCCGGCTACC GCGCCGGCAC CACGCTGGTG GGCATGCTCG ATCCGTTCGA CAAGCCCGGC
CTGCAGCGCC TGGCCGCCGC CGGCCTGACC AGCTTCGCGC TCGAAGCCGC GCCGCGCACC
ACCCGCGCGC AGAGCATGGA CGTGCTGTCC TCGCAGGCCA ACATCGCCGG CTACAAGGCG
GTGATGATGG CCGCCGACAA GTACCAGCGT TTCTTCCCGA TGCTGATGAC CGCCGCCGGC
ACCGTGAAGG CCGCCCGCGT GGTGATCCTG GGTGTCGGCG TGGCCGGCCT GCAGGCGATC
GCCACCGCCA AGCGCCTGGG CGCGGTGATC GAGGCGTCCG ACGTGCGCCC CTCCGTCAAG
GAGCAGATCG AATCGCTGGG CGGCAAGTTC ATCGACGTGC CGTATGAGAC CGACGAGGAG
CGCGAAGCCG CGGTCGGCGT CGGCGGCTAC GCCAAGCCGA TGCCGCCGAG CTGGATGGCA
CGCCAGAAGA TCGAGGTCGC CAAGCGCGTG GCGATGGCCG ACATCGTCAT CTCCACCGCG
CTGATCCCCG GCCGCGCCGC GCCGACGCTG ATCACCGAGG ACATGGTCAA GGCCATGAAA
CCGGGCTCGG TGATCGTCGA CATCGCCGCC GGCAAGGGCC CGAACCTGGC TGGCGAGATC
GGCGGCGGCA ACTGCCCGCT GACCGTGGCA GGCCAGACCG TCAAGGTGCA CGGCGTGACG
ATCGTCGGCG AGACCAACCT GCCCGCGCTG GTGGCGGCCG ACGCGTCGGC GCTTTACGCG
CGCAACGTGC TCGACTTCCT CAAGCTCATC CTCACCAAAG AGGGAACGCT TGCGGTGCCG
ATGGACGACG ACATCGTGGC GGCCTGCCTG ATGACGCAAA ACGGCGAACT GAAGAGGACC
TGA
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| Protein sequence | MLVGVPLELA AGETRVAVTP ETAKKLKAQG HTVRIQSGAG VAASAPDEAY VAVGAEITDA
AGVLACDLVL KVRAPSESEL AGYRAGTTLV GMLDPFDKPG LQRLAAAGLT SFALEAAPRT
TRAQSMDVLS SQANIAGYKA VMMAADKYQR FFPMLMTAAG TVKAARVVIL GVGVAGLQAI
ATAKRLGAVI EASDVRPSVK EQIESLGGKF IDVPYETDEE REAAVGVGGY AKPMPPSWMA
RQKIEVAKRV AMADIVISTA LIPGRAAPTL ITEDMVKAMK PGSVIVDIAA GKGPNLAGEI
GGGNCPLTVA GQTVKVHGVT IVGETNLPAL VAADASALYA RNVLDFLKLI LTKEGTLAVP
MDDDIVAACL MTQNGELKRT
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