Gene Lcho_0423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0423 
Symbol 
ID6163834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp464287 
End bp465024 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content71% 
IMG OID641663172 
Producthypothetical protein 
Protein accessionYP_001789463 
Protein GI171057114 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAT ATTTCCGCAA GACCGATCGC GGGCGTCGCG AGGTGCGCGA GCGCAGCATC 
AACCTGCCCC GCGCGGCGCG CAACCTGCTG CTGATACTCG ACAGCTCCAA GAGCCTCGAC 
AGCTGGATCG GCATGATCAA CGGTGCGTCG CTGACGGACG GTGAAATCCT GATCGAAGCC 
GGCCTGATCG AGCTCCAGCC CGGCCCCGGC CTGCCGTCGC GGCCGGCCGC CTTCGAGCCC 
ACCGAACCGG CCGGGCTCGA CGCCTGGCCC CCCGTCACCC GCCCGGCGCC GCTCGGGGCG 
GCCAAGCCGT TCGGGCTCAG CGCCGCCGCC AAGGCACCGC TACCGACCAC CTTCGACGAG 
CCGGTATCGC CCGACCGCCA CCGCCAGGTG CCCCTGCCGA TCGCGCATGC GACGGACTCG 
TCGTTCCTGG AGACGACGGC GGGCACGCTG CCGTCACGGC TGCCCGAGGA CATCAGCACC 
TTCATCCCGC TCGATGCCGG CGGCCTGCCG GAGGGCAGCA CCGGCCTGGG CTACACCGAG 
CTCTACGACA GCCTGAACGC GCTGCTGCGC GAGACGCTCG GCCTGTTCCG CGGCTACCGC 
TACACGCTGC GCATCGAGCG AGCGCAGAAC ATCGCCGAGC TCGAGGCGGT GGCGCGCGAG 
TTCATCACCG AGGTCAAGCA GGTGCGCGGC GAATCGATGG CGCGCATGGT GCAACGCGCC 
CTCGGCCTGG GCGGTTGA
 
Protein sequence
MAEYFRKTDR GRREVRERSI NLPRAARNLL LILDSSKSLD SWIGMINGAS LTDGEILIEA 
GLIELQPGPG LPSRPAAFEP TEPAGLDAWP PVTRPAPLGA AKPFGLSAAA KAPLPTTFDE 
PVSPDRHRQV PLPIAHATDS SFLETTAGTL PSRLPEDIST FIPLDAGGLP EGSTGLGYTE 
LYDSLNALLR ETLGLFRGYR YTLRIERAQN IAELEAVARE FITEVKQVRG ESMARMVQRA 
LGLGG